Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AC092720.2-201ENST00000602388 1665 ntBASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AL591742.1-201ENST00000604433 565 ntBASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AC011767.1-201ENST00000617410 1153 ntBASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AC013268.1-206ENST00000638368 961 ntBASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AC112229.1-201ENST00000639295 961 ntBASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 AL512408.1-201ENST00000569378 2000 ntBASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CHRDL1Q9BU40 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 AC018445.3-201ENST00000624177 1945 ntBASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.79■□□□□ 0.12
CHRDL1Q9BU40 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 DUX4L16-201ENST00000555130 1264 ntBASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHRDL1Q9BU40 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CHRDL1Q9BU40 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms