Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
GFI1Q99684 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.21■□□□□ 0.35
GFI1Q99684 LINC01465-201ENST00000408887 1940 ntBASIC17.21■□□□□ 0.35
GFI1Q99684 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.21■□□□□ 0.35
GFI1Q99684 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
GFI1Q99684 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.21■□□□□ 0.35
GFI1Q99684 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.21■□□□□ 0.35
GFI1Q99684 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.21■□□□□ 0.35
GFI1Q99684 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.21■□□□□ 0.35
GFI1Q99684 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.21■□□□□ 0.35
GFI1Q99684 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GFI1Q99684 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GFI1Q99684 AC087633.2-202ENST00000565166 1439 ntBASIC17.21■□□□□ 0.34
GFI1Q99684 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GFI1Q99684 AC019069.1-201ENST00000610008 1333 ntBASIC17.21■□□□□ 0.34
GFI1Q99684 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.21■□□□□ 0.34
GFI1Q99684 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GFI1Q99684 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GFI1Q99684 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
GFI1Q99684 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.2■□□□□ 0.34
GFI1Q99684 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.2■□□□□ 0.34
GFI1Q99684 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.2■□□□□ 0.34
GFI1Q99684 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GFI1Q99684 AL138781.2-201ENST00000617896 1843 ntBASIC17.2■□□□□ 0.34
GFI1Q99684 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.2■□□□□ 0.34
GFI1Q99684 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.2■□□□□ 0.34
GFI1Q99684 AC027612.3-201ENST00000413684 1047 ntBASIC17.2■□□□□ 0.34
GFI1Q99684 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GFI1Q99684 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
GFI1Q99684 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
GFI1Q99684 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.19■□□□□ 0.34
GFI1Q99684 AC008406.3-201ENST00000620001 1374 ntBASIC17.19■□□□□ 0.34
GFI1Q99684 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GFI1Q99684 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.19■□□□□ 0.34
GFI1Q99684 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.19■□□□□ 0.34
GFI1Q99684 SLC7A5P1-201ENST00000568957 537 ntBASIC17.19■□□□□ 0.34
GFI1Q99684 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.19■□□□□ 0.34
GFI1Q99684 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
GFI1Q99684 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.19■□□□□ 0.34
GFI1Q99684 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
GFI1Q99684 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GFI1Q99684 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
GFI1Q99684 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
GFI1Q99684 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.18■□□□□ 0.34
GFI1Q99684 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.18■□□□□ 0.34
GFI1Q99684 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.18■□□□□ 0.34
GFI1Q99684 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
GFI1Q99684 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
GFI1Q99684 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
GFI1Q99684 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.18■□□□□ 0.34
GFI1Q99684 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.18■□□□□ 0.34
GFI1Q99684 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
GFI1Q99684 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
GFI1Q99684 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.17■□□□□ 0.34
GFI1Q99684 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GFI1Q99684 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GFI1Q99684 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
GFI1Q99684 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.17■□□□□ 0.34
GFI1Q99684 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.17■□□□□ 0.34
GFI1Q99684 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.17■□□□□ 0.34
GFI1Q99684 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms