Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.14■□□□□ 0.17
RAB40CQ96S21 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.14■□□□□ 0.17
RAB40CQ96S21 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAB40CQ96S21 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.13■□□□□ 0.17
RAB40CQ96S21 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 FAM21FP-204ENST00000608637 956 ntBASIC16.13■□□□□ 0.17
RAB40CQ96S21 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 KRT87P-202ENST00000534226 1464 ntBASIC16.13■□□□□ 0.17
RAB40CQ96S21 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40CQ96S21 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40CQ96S21 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40CQ96S21 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40CQ96S21 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40CQ96S21 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40CQ96S21 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 AP001330.3-201ENST00000520123 633 ntBASIC16.12■□□□□ 0.17
RAB40CQ96S21 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40CQ96S21 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40CQ96S21 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40CQ96S21 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40CQ96S21 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 AF213884.3-201ENST00000563833 479 ntBASIC16.11■□□□□ 0.17
RAB40CQ96S21 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 AL136967.2-201ENST00000623968 743 ntBASIC16.11■□□□□ 0.17
RAB40CQ96S21 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 AC009237.14-201ENST00000609975 1594 ntBASIC16.11■□□□□ 0.17
RAB40CQ96S21 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40CQ96S21 RASA4CP-201ENST00000424092 1398 ntBASIC16.11■□□□□ 0.17
RAB40CQ96S21 AC020763.4-201ENST00000623414 4170 ntBASIC16.11■□□□□ 0.17
RAB40CQ96S21 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40CQ96S21 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40CQ96S21 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40CQ96S21 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms