Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 AC099778.1-201ENST00000568593 1911 ntBASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COX4I2Q96KJ9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COX4I2Q96KJ9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.39■□□□□ 0.54
COX4I2Q96KJ9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
COX4I2Q96KJ9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
COX4I2Q96KJ9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 KRT18P6-201ENST00000555540 1265 ntBASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 FP325331.1-202ENST00000623531 1380 ntBASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
COX4I2Q96KJ9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
COX4I2Q96KJ9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 AL121832.2-201ENST00000610979 668 ntBASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
COX4I2Q96KJ9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.36■□□□□ 0.53
COX4I2Q96KJ9 AL512408.1-201ENST00000569378 2000 ntBASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms