Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SPDL1Q96EA4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SPDL1Q96EA4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 TCF3P1-201ENST00000423021 1937 ntBASIC19.58■□□□□ 0.72
SPDL1Q96EA4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 AC093503.3-201ENST00000624917 2352 ntBASIC19.58■□□□□ 0.72
SPDL1Q96EA4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPDL1Q96EA4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.57■□□□□ 0.72
SPDL1Q96EA4 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 AC020763.4-201ENST00000623414 4170 ntBASIC19.57■□□□□ 0.72
SPDL1Q96EA4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
SPDL1Q96EA4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 AC090340.1-201ENST00000620778 4980 ntBASIC19.56■□□□□ 0.72
SPDL1Q96EA4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 AC008175.2-201ENST00000612840 297 ntBASIC19.56■□□□□ 0.72
SPDL1Q96EA4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPDL1Q96EA4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 POU5F1P4-201ENST00000413175 1085 ntBASIC19.55■□□□□ 0.72
SPDL1Q96EA4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.55■□□□□ 0.72
SPDL1Q96EA4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 AP001330.3-201ENST00000520123 633 ntBASIC19.54■□□□□ 0.72
SPDL1Q96EA4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPDL1Q96EA4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPDL1Q96EA4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms