Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FOXRED1Q96CU9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 KRT18P5-201ENST00000436075 1291 ntBASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 NTF6G-201ENST00000591094 616 ntBASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXRED1Q96CU9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 KRT19P1-201ENST00000405746 1186 ntBASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 TREX1-205ENST00000625293 1783 ntBASIC17.28■□□□□ 0.36
FOXRED1Q96CU9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXRED1Q96CU9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXRED1Q96CU9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXRED1Q96CU9 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.27■□□□□ 0.35
FOXRED1Q96CU9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.27■□□□□ 0.35
FOXRED1Q96CU9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXRED1Q96CU9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms