Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.66■■□□□ 1.54
RPGRQ92834 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.66■■□□□ 1.54
RPGRQ92834 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
RPGRQ92834 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.66■■□□□ 1.54
RPGRQ92834 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.66■■□□□ 1.54
RPGRQ92834 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.66■■□□□ 1.54
RPGRQ92834 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.66■■□□□ 1.54
RPGRQ92834 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC24.66■■□□□ 1.54
RPGRQ92834 C1QL1P1-201ENST00000568105 661 ntBASIC24.66■■□□□ 1.54
RPGRQ92834 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 AC073508.3-201ENST00000619697 1419 ntBASIC24.66■■□□□ 1.54
RPGRQ92834 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RPGRQ92834 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RPGRQ92834 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RPGRQ92834 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.65■■□□□ 1.54
RPGRQ92834 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.65■■□□□ 1.54
RPGRQ92834 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RPGRQ92834 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RPGRQ92834 FSCN1P1-201ENST00000568912 1481 ntBASIC24.64■■□□□ 1.54
RPGRQ92834 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
RPGRQ92834 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RPGRQ92834 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RPGRQ92834 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RPGRQ92834 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RPGRQ92834 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC24.64■■□□□ 1.54
RPGRQ92834 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RPGRQ92834 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
RPGRQ92834 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RPGRQ92834 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
RPGRQ92834 RBM42-202ENST00000586618 771 ntTSL 3 BASIC24.64■■□□□ 1.54
RPGRQ92834 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.64■■□□□ 1.54
RPGRQ92834 GRAMD4P8-201ENST00000605465 1115 ntBASIC24.64■■□□□ 1.54
RPGRQ92834 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.64■■□□□ 1.54
RPGRQ92834 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.64■■□□□ 1.53
RPGRQ92834 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RPGRQ92834 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC24.64■■□□□ 1.53
RPGRQ92834 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RPGRQ92834 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPGRQ92834 AL117328.2-201ENST00000624617 1940 ntBASIC24.63■■□□□ 1.53
RPGRQ92834 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC24.63■■□□□ 1.53
RPGRQ92834 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPGRQ92834 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
RPGRQ92834 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.63■■□□□ 1.53
RPGRQ92834 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.63■■□□□ 1.53
RPGRQ92834 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.63■■□□□ 1.53
RPGRQ92834 AC026271.3-201ENST00000571884 352 ntBASIC24.63■■□□□ 1.53
RPGRQ92834 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RPGRQ92834 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RPGRQ92834 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPGRQ92834 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RPGRQ92834 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPGRQ92834 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPGRQ92834 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC24.62■■□□□ 1.53
RPGRQ92834 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPGRQ92834 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC24.62■■□□□ 1.53
RPGRQ92834 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RPGRQ92834 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.62■■□□□ 1.53
RPGRQ92834 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC24.62■■□□□ 1.53
RPGRQ92834 AL445675.2-201ENST00000620291 557 ntBASIC24.62■■□□□ 1.53
RPGRQ92834 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPGRQ92834 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPGRQ92834 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RPGRQ92834 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.62■■□□□ 1.53
RPGRQ92834 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
RPGRQ92834 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RPGRQ92834 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.62■■□□□ 1.53
RPGRQ92834 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.62■■□□□ 1.53
RPGRQ92834 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC24.61■■□□□ 1.53
RPGRQ92834 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RPGRQ92834 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.61■■□□□ 1.53
RPGRQ92834 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RPGRQ92834 MESTP1-201ENST00000404287 994 ntBASIC24.61■■□□□ 1.53
RPGRQ92834 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC24.61■■□□□ 1.53
RPGRQ92834 DUX4L26-201ENST00000489078 1255 ntBASIC24.61■■□□□ 1.53
RPGRQ92834 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC24.61■■□□□ 1.53
RPGRQ92834 C2orf69P3-201ENST00000565542 1120 ntBASIC24.61■■□□□ 1.53
RPGRQ92834 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
RPGRQ92834 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RPGRQ92834 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RPGRQ92834 PLK5-205ENST00000642079 1969 ntBASIC24.6■■□□□ 1.53
RPGRQ92834 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RPGRQ92834 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.6■■□□□ 1.53
RPGRQ92834 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RPGRQ92834 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
RPGRQ92834 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms