Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.79■□□□□ 0.76
CKAP2Q8WWK9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.79■□□□□ 0.76
CKAP2Q8WWK9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.79■□□□□ 0.76
CKAP2Q8WWK9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CKAP2Q8WWK9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.79■□□□□ 0.76
CKAP2Q8WWK9 TSPY26P-201ENST00000476365 1326 ntBASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CKAP2Q8WWK9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 AC138907.5-202ENST00000569484 235 ntBASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKAP2Q8WWK9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
CKAP2Q8WWK9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CKAP2Q8WWK9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 AC120498.10-201ENST00000621827 505 ntBASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CKAP2Q8WWK9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CKAP2Q8WWK9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms