Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
SLC44A1Q8WWI5 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 AC016405.3-201ENST00000607710 860 ntBASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.96■□□□□ 0.79
SLC44A1Q8WWI5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SLC44A1Q8WWI5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 AL031963.3-201ENST00000606441 850 ntBASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC44A1Q8WWI5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 KRT16P6-202ENST00000425692 1426 ntBASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 AC007322.4-201ENST00000509611 723 ntBASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SLC44A1Q8WWI5 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 AP001271.2-201ENST00000624018 1556 ntBASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC44A1Q8WWI5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 344.4 ms