Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.15■□□□□ 0.5
CHD6Q8TD26 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD6Q8TD26 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.15■□□□□ 0.5
CHD6Q8TD26 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHD6Q8TD26 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.15■□□□□ 0.5
CHD6Q8TD26 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
CHD6Q8TD26 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.14■□□□□ 0.5
CHD6Q8TD26 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHD6Q8TD26 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CHD6Q8TD26 PGAM5P1-201ENST00000518923 814 ntBASIC18.14■□□□□ 0.5
CHD6Q8TD26 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.14■□□□□ 0.5
CHD6Q8TD26 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.14■□□□□ 0.5
CHD6Q8TD26 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHD6Q8TD26 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.14■□□□□ 0.5
CHD6Q8TD26 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CHD6Q8TD26 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHD6Q8TD26 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHD6Q8TD26 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 AC137767.1-201ENST00000602918 1920 ntBASIC18.14■□□□□ 0.49
CHD6Q8TD26 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHD6Q8TD26 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 AC016734.2-201ENST00000624325 1377 ntBASIC18.14■□□□□ 0.49
CHD6Q8TD26 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CHD6Q8TD26 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD6Q8TD26 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD6Q8TD26 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.13■□□□□ 0.49
CHD6Q8TD26 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD6Q8TD26 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD6Q8TD26 RCC2P6-201ENST00000526625 1557 ntBASIC18.13■□□□□ 0.49
CHD6Q8TD26 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD6Q8TD26 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD6Q8TD26 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CHD6Q8TD26 MIR940-201ENST00000401276 94 ntBASIC18.13■□□□□ 0.49
CHD6Q8TD26 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.13■□□□□ 0.49
CHD6Q8TD26 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.13■□□□□ 0.49
CHD6Q8TD26 FAM8A3P-201ENST00000427218 844 ntBASIC18.13■□□□□ 0.49
CHD6Q8TD26 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.13■□□□□ 0.49
CHD6Q8TD26 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CHD6Q8TD26 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.13■□□□□ 0.49
CHD6Q8TD26 AC116050.2-201ENST00000612102 1779 ntBASIC18.13■□□□□ 0.49
CHD6Q8TD26 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD6Q8TD26 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CHD6Q8TD26 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD6Q8TD26 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD6Q8TD26 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD6Q8TD26 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
CHD6Q8TD26 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CHD6Q8TD26 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 AC098831.1-202ENST00000438821 336 ntBASIC18.11■□□□□ 0.49
CHD6Q8TD26 AP000692.2-201ENST00000608391 879 ntBASIC18.11■□□□□ 0.49
CHD6Q8TD26 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 LINC01311-201ENST00000565162 1445 ntBASIC18.11■□□□□ 0.49
CHD6Q8TD26 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 AP000523.1-201ENST00000398242 1049 ntBASIC18.11■□□□□ 0.49
CHD6Q8TD26 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CHD6Q8TD26 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
CHD6Q8TD26 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHD6Q8TD26 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms