Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 TSPY14P-201ENST00000303979 915 ntBASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 AK4P3-201ENST00000418260 669 ntBASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 TPM4P1-201ENST00000436100 807 ntBASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 BX664615.1-201ENST00000443558 458 ntBASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 AC063952.2-201ENST00000498792 1227 ntBASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 KRT126P-201ENST00000549467 1181 ntBASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.84■□□□□ 0.61
SNIP1Q8TAD8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNIP1Q8TAD8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNIP1Q8TAD8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.83■□□□□ 0.61
SNIP1Q8TAD8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SNIP1Q8TAD8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
SNIP1Q8TAD8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 AL031985.4-201ENST00000642138 673 ntBASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
SNIP1Q8TAD8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 AC026271.3-201ENST00000571884 352 ntBASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 DGCR10-201ENST00000609839 495 ntBASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 FSCN1P1-201ENST00000568912 1481 ntBASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNIP1Q8TAD8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 KRT18P56-201ENST00000507275 550 ntBASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 AL121894.2-201ENST00000602977 491 ntBASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.81■□□□□ 0.6
SNIP1Q8TAD8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 ECEL1P2-202ENST00000465689 757 ntBASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 AC128688.1-201ENST00000487626 519 ntBASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 MYC-208ENST00000641036 567 ntBASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNIP1Q8TAD8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms