Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.13■□□□□ 0.97
TMEM35BQ8NCS4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 MYC-209ENST00000641252 345 ntBASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TMEM35BQ8NCS4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 TMEM179-206ENST00000616017 1645 ntBASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 AC073210.2-201ENST00000430369 194 ntBASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TMEM35BQ8NCS4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 AC098934.4-201ENST00000564127 592 ntBASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 AC142086.2-201ENST00000569753 217 ntBASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 AC133041.1-202ENST00000642053 222 ntBASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TMEM35BQ8NCS4 AFG3L1P-217ENST00000557444 2447 ntBASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 AL390719.1-204ENST00000412397 1219 ntBASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 AC005829.2-201ENST00000571422 1056 ntBASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TMEM35BQ8NCS4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEM35BQ8NCS4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms