Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC71LQ8N9Z2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 AC004408.2-201ENST00000623613 2777 ntBASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 RASA4CP-201ENST00000424092 1398 ntBASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 AL355001.2-201ENST00000620617 1191 ntBASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 Z82202.1-201ENST00000623446 1880 ntBASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CCDC71LQ8N9Z2 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 EDA-201ENST00000338901 1233 ntBASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 MTURN-203ENST00000409688 843 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 AP001330.3-201ENST00000520123 633 ntBASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC71LQ8N9Z2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC71LQ8N9Z2 PGM5P4-201ENST00000421970 445 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms