Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC01561Q8N1V8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 AL591742.1-201ENST00000604433 565 ntBASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC01561Q8N1V8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 YBX1P1-201ENST00000445822 960 ntBASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 AL031963.3-201ENST00000606441 850 ntBASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 AC093484.2-201ENST00000580996 2166 ntBASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 CYP21A1P-202ENST00000354927 1481 ntBASIC13.36□□□□□ -0.27
LINC01561Q8N1V8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 AC100791.3-201ENST00000617619 330 ntBASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 KRT8P20-201ENST00000423953 1409 ntBASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 TNXA-203ENST00000507684 2038 ntBASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC01561Q8N1V8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC01561Q8N1V8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms