Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.676e-7■■■□□ 15.3
SND1Q7KZF4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.376e-7■■■□□ 15.3
SND1Q7KZF4 HSPA8-212ENST00000528292 1112 ntTSL 26.67□□□□□ -1.342e-21■■■□□ 15.3
SND1Q7KZF4 HSPA8-209ENST00000526862 504 ntTSL 34.86□□□□□ -1.632e-21■■■□□ 15.3
SND1Q7KZF4 LMAN2-207ENST00000514458 616 ntTSL 521.36■■□□□ 1.012e-9■■■□□ 15.3
SND1Q7KZF4 ERMP1-204ENST00000475005 1219 ntTSL 522.73■■□□□ 1.235e-7■■■□□ 15.3
SND1Q7KZF4 BCAM-208ENST00000590196 518 ntTSL 515.82■□□□□ 0.128e-11■■■□□ 15.3
SND1Q7KZF4 IGSF1-203ENST00000370901 1820 ntTSL 1 (best) BASIC12.32□□□□□ -0.442e-7■■■□□ 15.3
SND1Q7KZF4 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC12.05□□□□□ -0.482e-7■■■□□ 15.3
SND1Q7KZF4 EMC3-204ENST00000487465 1909 ntTSL 1 (best)10.8□□□□□ -0.682e-8■■■□□ 15.3
SND1Q7KZF4 EMC3-205ENST00000497557 580 ntTSL 36.38□□□□□ -1.392e-8■■■□□ 15.3
SND1Q7KZF4 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.783e-33■■■□□ 15.3
SND1Q7KZF4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.543e-6■■■□□ 15.3
SND1Q7KZF4 CPE-202ENST00000431967 633 ntTSL 47.52□□□□□ -1.212e-8■■■□□ 15.3
SND1Q7KZF4 MOGS-208ENST00000486036 811 ntTSL 223.57■■□□□ 1.368e-11■■■□□ 15.3
SND1Q7KZF4 ITGAV-205ENST00000460641 604 ntTSL 510.07□□□□□ -0.83e-7■■■□□ 15.3
SND1Q7KZF4 TMEM43-202ENST00000432444 908 ntTSL 316.73■□□□□ 0.276e-7■■■□□ 15.3
SND1Q7KZF4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-68■■■□□ 15.3
SND1Q7KZF4 NAGLU-202ENST00000586516 510 ntTSL 216.75■□□□□ 0.278e-8■■■□□ 15.3
SND1Q7KZF4 MGAT1-208ENST00000504671 878 ntTSL 316.66■□□□□ 0.266e-8■■■□□ 15.3
SND1Q7KZF4 TMBIM6-224ENST00000551154 423 ntTSL 215.13■□□□□ 0.015e-12■■■□□ 15.3
SND1Q7KZF4 TMBIM6-223ENST00000550951 533 ntTSL 314.36□□□□□ -0.115e-12■■■□□ 15.3
SND1Q7KZF4 LMAN2-202ENST00000502560 876 ntTSL 319.59■□□□□ 0.732e-9■■■□□ 15.3
SND1Q7KZF4 CP-205ENST00000463556 590 ntTSL 25.9□□□□□ -1.468e-10■■■□□ 15.3
SND1Q7KZF4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.783e-8■■■□□ 15.3
SND1Q7KZF4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.753e-8■■■□□ 15.3
SND1Q7KZF4 CAPRIN1-210ENST00000531668 479 ntTSL 317.72■□□□□ 0.431e-13■■■□□ 15.3
SND1Q7KZF4 CLN3-249ENST00000636685 801 ntTSL 515.14■□□□□ 0.016e-10■■■□□ 15.3
SND1Q7KZF4 CAPRIN1-213ENST00000533562 591 ntTSL 212.8□□□□□ -0.361e-13■■■□□ 15.3
SND1Q7KZF4 ARL6IP5-204ENST00000484921 551 ntTSL 512.06□□□□□ -0.482e-7■■■□□ 15.3
SND1Q7KZF4 CHST11-204ENST00000549016 573 ntTSL 411.83□□□□□ -0.523e-8■■■□□ 15.3
SND1Q7KZF4 CAPRIN1-206ENST00000528948 585 ntTSL 210.07□□□□□ -0.81e-13■■■□□ 15.3
SND1Q7KZF4 PRKCSH-214ENST00000591946 569 ntTSL 26.32□□□□□ -1.43e-34■■■□□ 15.3
SND1Q7KZF4 MIR6748-201ENST00000610433 71 ntBASIC5.09□□□□□ -1.591e-13■■■□□ 15.3
SND1Q7KZF4 GTF3C1-204ENST00000564664 933 ntTSL 512.57□□□□□ -0.42e-8■■■□□ 15.3
SND1Q7KZF4 FBLN1-215ENST00000460538 543 ntTSL 212.96□□□□□ -0.336e-8■■■□□ 15.3
SND1Q7KZF4 SQLE-204ENST00000520493 737 ntTSL 36.96□□□□□ -1.32e-11■■■□□ 15.3
SND1Q7KZF4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.121e-8■■■□□ 15.2
SND1Q7KZF4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.59■□□□□ 0.091e-8■■■□□ 15.2
SND1Q7KZF4 EPRS-205ENST00000485821 598 ntTSL 39.22□□□□□ -0.936e-7■■■□□ 15.2
SND1Q7KZF4 WARS-209ENST00000553581 572 ntTSL 418.79■□□□□ 0.68e-14■■■□□ 15.2
SND1Q7KZF4 WARS-212ENST00000553934 530 ntTSL 317.94■□□□□ 0.468e-14■■■□□ 15.2
SND1Q7KZF4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.551e-6■■■□□ 15.2
SND1Q7KZF4 SLC50A1-211ENST00000490276 778 ntTSL 319.86■□□□□ 0.775e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.5■□□□□ 0.555e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.07■□□□□ 0.325e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-210ENST00000488609 890 ntTSL 316.41■□□□□ 0.225e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC13.99□□□□□ -0.175e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.265e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC12.68□□□□□ -0.385e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-204ENST00000368405 1003 ntTSL 212.28□□□□□ -0.445e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-208ENST00000484027 596 ntTSL 312□□□□□ -0.495e-8■■■□□ 15.2
SND1Q7KZF4 SLC50A1-212ENST00000490770 991 ntTSL 311.7□□□□□ -0.545e-8■■■□□ 15.2
SND1Q7KZF4 LDLR-212ENST00000560467 928 ntTSL 312.25□□□□□ -0.451e-8■■■□□ 15.2
SND1Q7KZF4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.073e-8■■■□□ 15.2
SND1Q7KZF4 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.33e-8■■■□□ 15.2
SND1Q7KZF4 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC12.26□□□□□ -0.453e-8■■■□□ 15.2
SND1Q7KZF4 ERGIC3-206ENST00000416206 1235 ntTSL 511.67□□□□□ -0.543e-8■■■□□ 15.2
SND1Q7KZF4 ALCAM-202ENST00000460954 564 ntTSL 47.85□□□□□ -1.151e-8■■■□□ 15.2
SND1Q7KZF4 ALCAM-206ENST00000481337 1242 ntTSL 27.48□□□□□ -1.211e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.7■■□□□ 1.223e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.57■□□□□ 0.563e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-206ENST00000586319 936 ntTSL 317.96■□□□□ 0.473e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.423e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.97■□□□□ 0.313e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-210ENST00000589151 431 ntTSL 216.61■□□□□ 0.253e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.18■□□□□ 0.183e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.57■□□□□ 0.083e-8■■■□□ 15.2
SND1Q7KZF4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.44■□□□□ 0.063e-8■■■□□ 15.2
SND1Q7KZF4 CPQ-205ENST00000521142 677 ntTSL 47.6□□□□□ -1.195e-7■■■□□ 15.2
SND1Q7KZF4 GUSB-211ENST00000476486 776 ntTSL 316.75■□□□□ 0.271e-6■■■□□ 15.2
SND1Q7KZF4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.15■■■□□ 2.421e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.881e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.641e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-209ENST00000476512 942 ntTSL 318.37■□□□□ 0.531e-12■■■□□ 15.2
SND1Q7KZF4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.513e-7■■■□□ 15.2
SND1Q7KZF4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.56■□□□□ 0.41e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-210ENST00000491346 1116 ntTSL 516.72■□□□□ 0.271e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.71■□□□□ 0.111e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.07■□□□□ 01e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-208ENST00000476309 748 ntTSL 315.07■□□□□ 01e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.93□□□□□ -0.021e-12■■■□□ 15.2
SND1Q7KZF4 MICA-210ENST00000616296 2260 ntTSL 5 BASIC14.61□□□□□ -0.073e-7■■■□□ 15.2
SND1Q7KZF4 AGTRAP-214ENST00000514733 919 ntTSL 313.96□□□□□ -0.171e-12■■■□□ 15.2
SND1Q7KZF4 AGTRAP-213ENST00000513739 566 ntTSL 313.01□□□□□ -0.331e-12■■■□□ 15.2
SND1Q7KZF4 HSPA8-211ENST00000527983 1509 ntTSL 1 (best)12.09□□□□□ -0.472e-21■■■□□ 15.2
SND1Q7KZF4 ABHD2-209ENST00000569411 558 ntTSL 511.85□□□□□ -0.514e-12■■■□□ 15.2
SND1Q7KZF4 MICA-208ENST00000421350 1005 ntTSL 511.69□□□□□ -0.543e-7■■■□□ 15.2
SND1Q7KZF4 HIST1H2BB-201ENST00000615966 381 ntAPPRIS P1 BASIC11.1□□□□□ -0.633e-7■■■□□ 15.2
SND1Q7KZF4 HEXB-204ENST00000505859 604 ntTSL 39.48□□□□□ -0.893e-7■■■□□ 15.2
SND1Q7KZF4 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC9.01□□□□□ -0.973e-7■■■□□ 15.2
SND1Q7KZF4 HEXB-202ENST00000503312 756 ntTSL 58.7□□□□□ -1.023e-7■■■□□ 15.2
SND1Q7KZF4 AGTRAP-207ENST00000471765 717 ntTSL 38.64□□□□□ -1.031e-12■■■□□ 15.2
SND1Q7KZF4 HEXB-205ENST00000509579 806 ntTSL 2 BASIC8.29□□□□□ -1.083e-7■■■□□ 15.2
SND1Q7KZF4 HEXB-210ENST00000513336 720 ntTSL 38.29□□□□□ -1.083e-7■■■□□ 15.2
SND1Q7KZF4 HEXB-211ENST00000513539 502 ntTSL 38.23□□□□□ -1.093e-7■■■□□ 15.2
SND1Q7KZF4 ITGA6-209ENST00000470259 365 ntTSL 37.22□□□□□ -1.253e-7■■■□□ 15.2
SND1Q7KZF4 HEXB-203ENST00000504459 899 ntTSL 36.07□□□□□ -1.443e-7■■■□□ 15.2
SND1Q7KZF4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.921e-12■■■□□ 15.2
SND1Q7KZF4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.7■□□□□ 0.91e-12■■■□□ 15.2
Retrieved 100 of 13,567 protein–RNA pairs in 125.3 ms