RNA–Protein interactions for RNA: ENST00000460954.1

ALCAM-202, Transcript of activated leukocyte cell adhesion molecule, humanhuman

TSL 4

Gene ALCAM, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-202ENST00000460954 AEBP2Q6ZN18 517 aaPredicted RBP32.24■■■□□ 2.75
ALCAM-202ENST00000460954 CHIC1Q5VXU3 224 aa30.55■■■□□ 2.48
ALCAM-202ENST00000460954 SENP3Q9H4L4 574 aaPredicted RBP27.45■■□□□ 1.98
ALCAM-202ENST00000460954 PHF23Q9BUL5 403 aaPredicted RBP27.15■■□□□ 1.94
ALCAM-202ENST00000460954 FOXD1Q16676 465 aa25.64■■□□□ 1.7
ALCAM-202ENST00000460954 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
ALCAM-202ENST00000460954 PPP6R1Q9UPN7 881 aa23.99■■□□□ 1.43
ALCAM-202ENST00000460954 MSH5O43196 834 aa23.96■■□□□ 1.43
ALCAM-202ENST00000460954 PIAS4Q8N2W9 510 aaPredicted RBP23.94■■□□□ 1.42
ALCAM-202ENST00000460954 ADRA2BP18089 450 aa23.91■■□□□ 1.42
ALCAM-202ENST00000460954 POTEDQ86YR6 584 aa23.5■■□□□ 1.35
ALCAM-202ENST00000460954 MAPK8IP2Q13387 824 aaPredicted RBP21.99■■□□□ 1.11
ALCAM-202ENST00000460954 SCAF1Q9H7N4 1312 aaKnown RBP21.81■■□□□ 1.08
ALCAM-202ENST00000460954 DMRT2Q9Y5R5 561 aa21.77■■□□□ 1.08
ALCAM-202ENST00000460954 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
ALCAM-202ENST00000460954 CNKSR2Q8WXI2 1034 aa20.98■□□□□ 0.95
ALCAM-202ENST00000460954 HOXD11P31277 338 aaPredicted RBP20.96■□□□□ 0.95
ALCAM-202ENST00000460954 DCAF8L1A6NGE4 600 aa20.95■□□□□ 0.94
ALCAM-202ENST00000460954 RNF216Q9NWF9 866 aaPredicted RBP20.79■□□□□ 0.92
ALCAM-202ENST00000460954 CACNB1Q02641 598 aaPredicted RBP20.64■□□□□ 0.89
ALCAM-202ENST00000460954 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
ALCAM-202ENST00000460954 RNF39Q9H2S5 420 aa20.46■□□□□ 0.87
ALCAM-202ENST00000460954 NPM3O75607 178 aaKnown RBP20.27■□□□□ 0.84
ALCAM-202ENST00000460954 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
ALCAM-202ENST00000460954 C1QBPQ07021 282 aaKnown RBP20.15■□□□□ 0.82
ALCAM-202ENST00000460954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.79
ALCAM-202ENST00000460954 KCNA4P22459 653 aa19.86■□□□□ 0.77
ALCAM-202ENST00000460954 U3KPZ7 1027 aaPredicted RBP19.56■□□□□ 0.72
ALCAM-202ENST00000460954 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
ALCAM-202ENST00000460954 SPINK5Q9NQ38 1064 aaPredicted RBP19.33■□□□□ 0.68
ALCAM-202ENST00000460954 CAPN15O75808 1086 aa19.29■□□□□ 0.68
ALCAM-202ENST00000460954 DSG3P32926 999 aa19.17■□□□□ 0.66
ALCAM-202ENST00000460954 TRHP20396 242 aaPredicted RBP18.98■□□□□ 0.63
ALCAM-202ENST00000460954 APLP2Q06481 763 aa18.96■□□□□ 0.63
ALCAM-202ENST00000460954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
ALCAM-202ENST00000460954 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
ALCAM-202ENST00000460954 ZNF219Q9P2Y4 722 aaPredicted RBP18.87■□□□□ 0.61
ALCAM-202ENST00000460954 ABCB7O75027 752 aa18.85■□□□□ 0.61
ALCAM-202ENST00000460954 SAMD1Q6SPF0 538 aaPredicted RBP18.85■□□□□ 0.61
ALCAM-202ENST00000460954 SLC4A1APQ9BWU0 796 aaKnown RBP18.73■□□□□ 0.59
ALCAM-202ENST00000460954 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
ALCAM-202ENST00000460954 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
ALCAM-202ENST00000460954 POLA2Q14181 598 aa18.46■□□□□ 0.55
ALCAM-202ENST00000460954 POTEHQ6S545 545 aa18.4■□□□□ 0.54
ALCAM-202ENST00000460954 ATF5Q9Y2D1 282 aaPredicted RBP18.35■□□□□ 0.53
ALCAM-202ENST00000460954 ZBTB22O15209 634 aa18.25■□□□□ 0.51
ALCAM-202ENST00000460954 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
ALCAM-202ENST00000460954 ZBTB12Q9Y330 459 aaPredicted RBP17.99■□□□□ 0.47
ALCAM-202ENST00000460954 ATXN8OSP0DMR3 200 aa17.92■□□□□ 0.46
ALCAM-202ENST00000460954 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
ALCAM-202ENST00000460954 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
ALCAM-202ENST00000460954 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
ALCAM-202ENST00000460954 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
ALCAM-202ENST00000460954 FBLN2P98095 1184 aa17.58■□□□□ 0.4
ALCAM-202ENST00000460954 PITPNM1O00562 1244 aa17.5■□□□□ 0.39
ALCAM-202ENST00000460954 MKRN4PQ13434 485 aaPredicted RBP17.48■□□□□ 0.39
ALCAM-202ENST00000460954 SPDYE2BA6NHP3 402 aa17.46■□□□□ 0.39
ALCAM-202ENST00000460954 SPDYE6P0CI01 402 aa17.46■□□□□ 0.39
ALCAM-202ENST00000460954 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
ALCAM-202ENST00000460954 PIP4P2Q8N4L2 257 aa17.46■□□□□ 0.39
ALCAM-202ENST00000460954 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
ALCAM-202ENST00000460954 FXR2P51116 673 aaKnown RBP eCLIP17.35■□□□□ 0.37
ALCAM-202ENST00000460954 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
ALCAM-202ENST00000460954 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
ALCAM-202ENST00000460954 SP7Q8TDD2 431 aaPredicted RBP17.22■□□□□ 0.35
ALCAM-202ENST00000460954 CLEC11AQ9Y240 323 aa17.21■□□□□ 0.35
ALCAM-202ENST00000460954 HAX1O00165 279 aa17.19■□□□□ 0.34
ALCAM-202ENST00000460954 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
ALCAM-202ENST00000460954 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
ALCAM-202ENST00000460954 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
ALCAM-202ENST00000460954 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
ALCAM-202ENST00000460954 EVX2Q03828 476 aa17■□□□□ 0.31
ALCAM-202ENST00000460954 PRR29P0C7W0 189 aa16.9■□□□□ 0.3
ALCAM-202ENST00000460954 CHADLQ6NUI6 762 aa16.9■□□□□ 0.3
ALCAM-202ENST00000460954 C19orf67A6NJJ6 358 aa16.79■□□□□ 0.28
ALCAM-202ENST00000460954 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
ALCAM-202ENST00000460954 FARP1Q9Y4F1 1045 aaPredicted RBP16.6■□□□□ 0.25
ALCAM-202ENST00000460954 GABBR2O75899 941 aa16.58■□□□□ 0.24
ALCAM-202ENST00000460954 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
ALCAM-202ENST00000460954 CD44P16070 742 aaKnown RBP16.5■□□□□ 0.23
ALCAM-202ENST00000460954 CREBZFQ9NS37 354 aa16.47■□□□□ 0.23
ALCAM-202ENST00000460954 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
ALCAM-202ENST00000460954 POTEIP0CG38 1075 aa16.24■□□□□ 0.19
ALCAM-202ENST00000460954 CLCN6P51797 869 aa16.24■□□□□ 0.19
ALCAM-202ENST00000460954 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
ALCAM-202ENST00000460954 LHX8Q68G74 356 aa16.19■□□□□ 0.18
ALCAM-202ENST00000460954 MNX1P50219 401 aaPredicted RBP16.17■□□□□ 0.18
ALCAM-202ENST00000460954 PROM2Q8N271 834 aa16.17■□□□□ 0.18
ALCAM-202ENST00000460954 NPM1P06748 294 aaKnown RBP eCLIP16.15■□□□□ 0.18
ALCAM-202ENST00000460954 DCBLD2Q96PD2 775 aa16.12■□□□□ 0.17
ALCAM-202ENST00000460954 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
ALCAM-202ENST00000460954 GALR2O43603 387 aaPredicted RBP16.08■□□□□ 0.16
ALCAM-202ENST00000460954 PHF12Q96QT6 1004 aa16.06■□□□□ 0.16
ALCAM-202ENST00000460954 MIER1Q8N108 512 aa15.91■□□□□ 0.14
ALCAM-202ENST00000460954 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
ALCAM-202ENST00000460954 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
ALCAM-202ENST00000460954 MS4A3Q96HJ5 214 aa15.83■□□□□ 0.12
ALCAM-202ENST00000460954 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
ALCAM-202ENST00000460954 CCDC61Q9Y6R9 512 aa15.79■□□□□ 0.12
ALCAM-202ENST00000460954 FKBP8Q14318 412 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms