RNA–Protein interactions for RNA: ENST00000591946.5

PRKCSH-214, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-214ENST00000591946 CHIC1Q5VXU3 224 aa12.02□□□□□ -0.49
PRKCSH-214ENST00000591946 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
PRKCSH-214ENST00000591946 PHF23Q9BUL5 403 aaPredicted RBP10.69□□□□□ -0.7
PRKCSH-214ENST00000591946 PLPPR3Q6T4P5 718 aa10.08□□□□□ -0.8
PRKCSH-214ENST00000591946 EHMT2Q96KQ7 1210 aa9.97□□□□□ -0.81
PRKCSH-214ENST00000591946 KCNA4P22459 653 aa9.67□□□□□ -0.86
PRKCSH-214ENST00000591946 SENP3Q9H4L4 574 aaPredicted RBP9.66□□□□□ -0.86
PRKCSH-214ENST00000591946 ADRA2BP18089 450 aa9.48□□□□□ -0.89
PRKCSH-214ENST00000591946 CSRNP3Q8WYN3 585 aa9.48□□□□□ -0.89
PRKCSH-214ENST00000591946 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
PRKCSH-214ENST00000591946 NISCHQ9Y2I1 1504 aa9.35□□□□□ -0.91
PRKCSH-214ENST00000591946 SLC4A1APQ9BWU0 796 aaKnown RBP9.33□□□□□ -0.92
PRKCSH-214ENST00000591946 PPP6R1Q9UPN7 881 aa9.19□□□□□ -0.94
PRKCSH-214ENST00000591946 RTN4Q9NQC3 1192 aaKnown RBP9.12□□□□□ -0.95
PRKCSH-214ENST00000591946 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
PRKCSH-214ENST00000591946 PPP4R3CPQ6ZMV5 832 aa9□□□□□ -0.97
PRKCSH-214ENST00000591946 NCBP3Q53F19 620 aaKnown RBP8.95□□□□□ -0.98
PRKCSH-214ENST00000591946 ZBTB22O15209 634 aa8.92□□□□□ -0.98
PRKCSH-214ENST00000591946 FOXD1Q16676 465 aa8.92□□□□□ -0.98
PRKCSH-214ENST00000591946 NPM3O75607 178 aaKnown RBP8.86□□□□□ -0.99
PRKCSH-214ENST00000591946 FOXD4L1Q9NU39 408 aa8.65□□□□□ -1.02
PRKCSH-214ENST00000591946 PIAS4Q8N2W9 510 aaPredicted RBP8.59□□□□□ -1.03
PRKCSH-214ENST00000591946 CNKSR2Q8WXI2 1034 aa8.56□□□□□ -1.04
PRKCSH-214ENST00000591946 FKBP8Q14318 412 aa8.52□□□□□ -1.05
PRKCSH-214ENST00000591946 DNAJC5BQ9UF47 199 aa8.42□□□□□ -1.06
PRKCSH-214ENST00000591946 SCAF1Q9H7N4 1312 aaKnown RBP8.37□□□□□ -1.07
PRKCSH-214ENST00000591946 PRKCSHP14314 528 aaPredicted RBP8.35□□□□□ -1.07
PRKCSH-214ENST00000591946 PLCB2Q00722 1185 aa8.33□□□□□ -1.08
PRKCSH-214ENST00000591946 BCANQ96GW7 911 aa8.28□□□□□ -1.08
PRKCSH-214ENST00000591946 ATXN8OSP0DMR3 200 aa8.25□□□□□ -1.09
PRKCSH-214ENST00000591946 HAP1P54257 671 aaPredicted RBP8.24□□□□□ -1.09
PRKCSH-214ENST00000591946 TAOK2Q9UL54 1235 aa8.24□□□□□ -1.09
PRKCSH-214ENST00000591946 RNF216Q9NWF9 866 aaPredicted RBP8.2□□□□□ -1.1
PRKCSH-214ENST00000591946 SLC4A2P04920 1241 aa8.19□□□□□ -1.1
PRKCSH-214ENST00000591946 MAPK8IP2Q13387 824 aaPredicted RBP8.17□□□□□ -1.1
PRKCSH-214ENST00000591946 MYCNP04198 464 aaPredicted RBP8.14□□□□□ -1.11
PRKCSH-214ENST00000591946 TPRNQ4KMQ1 711 aa8.12□□□□□ -1.11
PRKCSH-214ENST00000591946 VSIG10Q8N0Z9 540 aa8.1□□□□□ -1.11
PRKCSH-214ENST00000591946 CCDC180Q9P1Z9 1646 aa8.07□□□□□ -1.12
PRKCSH-214ENST00000591946 DCAF8L2P0C7V8 631 aa8.05□□□□□ -1.12
PRKCSH-214ENST00000591946 DAXXQ9UER7 740 aaPredicted RBP8□□□□□ -1.13
PRKCSH-214ENST00000591946 HOXD11P31277 338 aaPredicted RBP7.97□□□□□ -1.13
PRKCSH-214ENST00000591946 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
PRKCSH-214ENST00000591946 TIMELESSQ9UNS1 1208 aa7.96□□□□□ -1.14
PRKCSH-214ENST00000591946 KDM2AQ9Y2K7 1162 aa7.96□□□□□ -1.14
PRKCSH-214ENST00000591946 ATF5Q9Y2D1 282 aaPredicted RBP7.93□□□□□ -1.14
PRKCSH-214ENST00000591946 TULP1O00294 542 aaPredicted RBP7.91□□□□□ -1.14
PRKCSH-214ENST00000591946 FBLN2P98095 1184 aa7.91□□□□□ -1.14
PRKCSH-214ENST00000591946 ZCCHC6Q5VYS8 1495 aaKnown RBP7.9□□□□□ -1.14
PRKCSH-214ENST00000591946 ARXQ96QS3 562 aa7.9□□□□□ -1.14
PRKCSH-214ENST00000591946 MSH5O43196 834 aa7.88□□□□□ -1.15
PRKCSH-214ENST00000591946 PKD2Q13563 968 aa7.87□□□□□ -1.15
PRKCSH-214ENST00000591946 VASPP50552 380 aaPredicted RBP7.86□□□□□ -1.15
PRKCSH-214ENST00000591946 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.86□□□□□ -1.15
PRKCSH-214ENST00000591946 IFNLR1Q8IU57 520 aaPredicted RBP7.84□□□□□ -1.15
PRKCSH-214ENST00000591946 DMRT2Q9Y5R5 561 aa7.84□□□□□ -1.15
PRKCSH-214ENST00000591946 PAXIP1Q6ZW49 1069 aaPredicted RBP7.83□□□□□ -1.16
PRKCSH-214ENST00000591946 BBXQ8WY36 941 aaPredicted RBP7.83□□□□□ -1.16
PRKCSH-214ENST00000591946 GTF3C3Q9Y5Q9 886 aa7.82□□□□□ -1.16
PRKCSH-214ENST00000591946 CFAP44Q96MT7 982 aa7.81□□□□□ -1.16
PRKCSH-214ENST00000591946 SHROOM4Q9ULL8 1493 aa7.81□□□□□ -1.16
PRKCSH-214ENST00000591946 SPDYE4A6NLX3 237 aa7.78□□□□□ -1.16
PRKCSH-214ENST00000591946 NPM1P06748 294 aaKnown RBP eCLIP7.76□□□□□ -1.17
PRKCSH-214ENST00000591946 ERICH6Q7L0X2 663 aa7.75□□□□□ -1.17
PRKCSH-214ENST00000591946 PROM2Q8N271 834 aa7.74□□□□□ -1.17
PRKCSH-214ENST00000591946 TSHZ2Q9NRE2 1034 aa7.74□□□□□ -1.17
PRKCSH-214ENST00000591946 DCAF1Q9Y4B6 1507 aa7.73□□□□□ -1.17
PRKCSH-214ENST00000591946 SAMD1Q6SPF0 538 aaPredicted RBP7.72□□□□□ -1.17
PRKCSH-214ENST00000591946 HOMEZQ8IX15 550 aa7.71□□□□□ -1.18
PRKCSH-214ENST00000591946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.7□□□□□ -1.18
PRKCSH-214ENST00000591946 NBR1Q14596 966 aa7.7□□□□□ -1.18
PRKCSH-214ENST00000591946 HNRNPUL2Q1KMD3 747 aaKnown RBP7.7□□□□□ -1.18
PRKCSH-214ENST00000591946 SPRYD3Q8NCJ5 442 aa7.69□□□□□ -1.18
PRKCSH-214ENST00000591946 ECM2O94769 699 aaPredicted RBP7.67□□□□□ -1.18
PRKCSH-214ENST00000591946 ZNF219Q9P2Y4 722 aaPredicted RBP7.67□□□□□ -1.18
PRKCSH-214ENST00000591946 TMEM132AQ24JP5 1023 aa7.66□□□□□ -1.18
PRKCSH-214ENST00000591946 SUPT5HO00267 1087 aaKnown RBP7.65□□□□□ -1.18
PRKCSH-214ENST00000591946 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.62□□□□□ -1.199e-11■□□□□ 8.5
PRKCSH-214ENST00000591946 MKRN4PQ13434 485 aaPredicted RBP7.61□□□□□ -1.19
PRKCSH-214ENST00000591946 C14orf37Q86TY3 774 aa7.6□□□□□ -1.19
PRKCSH-214ENST00000591946 DNAJC5Q9H3Z4 198 aa7.6□□□□□ -1.19
PRKCSH-214ENST00000591946 RGL2O15211 777 aa7.59□□□□□ -1.19
PRKCSH-214ENST00000591946 SPOCK2Q92563 424 aa7.59□□□□□ -1.19
PRKCSH-214ENST00000591946 U3KPZ7 1027 aaPredicted RBP7.59□□□□□ -1.19
PRKCSH-214ENST00000591946 KLHL34Q8N239 644 aa7.57□□□□□ -1.2
PRKCSH-214ENST00000591946 MYO15BQ96JP2 1530 aa7.53□□□□□ -1.2
PRKCSH-214ENST00000591946 CHGAP10645 457 aaKnown RBP7.52□□□□□ -1.21
PRKCSH-214ENST00000591946 DCAF8L1A6NGE4 600 aa7.51□□□□□ -1.21
PRKCSH-214ENST00000591946 ABCC9O60706 1549 aa7.47□□□□□ -1.21
PRKCSH-214ENST00000591946 SCRIBQ14160 1630 aa7.44□□□□□ -1.22
PRKCSH-214ENST00000591946 RANGAP1P46060 587 aaPredicted RBP7.42□□□□□ -1.22
PRKCSH-214ENST00000591946 APLP2Q06481 763 aa7.42□□□□□ -1.22
PRKCSH-214ENST00000591946 PODXL2Q9NZ53 605 aa7.42□□□□□ -1.22
PRKCSH-214ENST00000591946 NACADO15069 1562 aa7.42□□□□□ -1.22
PRKCSH-214ENST00000591946 HS6ST3Q8IZP7 471 aa7.38□□□□□ -1.23
PRKCSH-214ENST00000591946 PLCD3Q8N3E9 789 aa7.37□□□□□ -1.23
PRKCSH-214ENST00000591946 CIZ1Q9ULV3 898 aaPredicted RBP7.37□□□□□ -1.23
PRKCSH-214ENST00000591946 RSF1Q96T23 1441 aaPredicted RBP7.35□□□□□ -1.23
PRKCSH-214ENST00000591946 STAG3Q9UJ98 1225 aa7.34□□□□□ -1.23
PRKCSH-214ENST00000591946 RB1CC1Q8TDY2 1594 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms