Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR718-201ENST00000390190 70 ntBASIC20.88■□□□□ 0.93
RNF43Q68DV7 ECEL1P3-201ENST00000427961 737 ntBASIC20.88■□□□□ 0.93
RNF43Q68DV7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF43Q68DV7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF43Q68DV7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF43Q68DV7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RNF43Q68DV7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF43Q68DV7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.87■□□□□ 0.93
RNF43Q68DV7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF43Q68DV7 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF43Q68DV7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 AC073912.3-201ENST00000624414 853 ntBASIC20.86■□□□□ 0.93
RNF43Q68DV7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF43Q68DV7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF43Q68DV7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 AC006128.1-201ENST00000624704 1661 ntBASIC20.85■□□□□ 0.93
RNF43Q68DV7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RNF43Q68DV7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF43Q68DV7 AC092368.3-202ENST00000574180 1591 ntBASIC20.85■□□□□ 0.93
RNF43Q68DV7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF43Q68DV7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.84■□□□□ 0.93
RNF43Q68DV7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms