Protein–RNA interactions for Protein: Q5VV17

OTUD1, OTU domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD1Q5VV17 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.69■□□□□ 0.9
OTUD1Q5VV17 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 TSPY20P-201ENST00000450910 630 ntBASIC20.68■□□□□ 0.9
OTUD1Q5VV17 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.68■□□□□ 0.9
OTUD1Q5VV17 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
OTUD1Q5VV17 PHGDH-210ENST00000641115 1638 ntBASIC20.67■□□□□ 0.9
OTUD1Q5VV17 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 POM121L13P-201ENST00000422362 380 ntBASIC20.67■□□□□ 0.9
OTUD1Q5VV17 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.67■□□□□ 0.9
OTUD1Q5VV17 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.66■□□□□ 0.9
OTUD1Q5VV17 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 POU5F1P3-201ENST00000428824 1078 ntBASIC20.66■□□□□ 0.9
OTUD1Q5VV17 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 AC116351.2-201ENST00000606540 1585 ntBASIC20.66■□□□□ 0.9
OTUD1Q5VV17 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
OTUD1Q5VV17 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.65■□□□□ 0.9
OTUD1Q5VV17 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 AC069544.1-201ENST00000609399 999 ntBASIC20.65■□□□□ 0.9
OTUD1Q5VV17 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
OTUD1Q5VV17 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
OTUD1Q5VV17 AC018553.1-201ENST00000616682 1458 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms