Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC30.39■■■□□ 2.46
CDC42BPAQ5VT25 NT5C-211ENST00000582170 653 ntTSL 3 BASIC30.39■■■□□ 2.46
CDC42BPAQ5VT25 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CDC42BPAQ5VT25 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDC42BPAQ5VT25 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDC42BPAQ5VT25 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC30.39■■■□□ 2.46
CDC42BPAQ5VT25 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC30.39■■■□□ 2.46
CDC42BPAQ5VT25 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CDC42BPAQ5VT25 AC004980.1-204ENST00000429707 299 ntBASIC30.39■■■□□ 2.45
CDC42BPAQ5VT25 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC30.39■■■□□ 2.45
CDC42BPAQ5VT25 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC30.39■■■□□ 2.45
CDC42BPAQ5VT25 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 PLK5-205ENST00000642079 1969 ntBASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 FSCN1P1-201ENST00000568912 1481 ntBASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 AC011506.1-201ENST00000474329 610 ntBASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 KRT18P16-201ENST00000510337 1294 ntBASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 WWOX-216ENST00000569818 525 ntBASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC30.38■■■□□ 2.45
CDC42BPAQ5VT25 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDC42BPAQ5VT25 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 AC022616.7-201ENST00000525383 220 ntBASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 NTF6B-201ENST00000591913 560 ntBASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC30.36■■■□□ 2.45
CDC42BPAQ5VT25 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 AP006587.1-201ENST00000534129 1502 ntBASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 TFP1-202ENST00000475455 1573 ntBASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 DPP3P2-201ENST00000416030 1696 ntBASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 ECEL1P2-202ENST00000465689 757 ntBASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CDC42BPAQ5VT25 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 BID-212ENST00000614949 1988 ntTSL 5 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 TPM1-226ENST00000560959 925 ntTSL 2 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 AC018553.1-201ENST00000616682 1458 ntBASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC30.34■■■□□ 2.45
CDC42BPAQ5VT25 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC30.33■■■□□ 2.45
CDC42BPAQ5VT25 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CDC42BPAQ5VT25 MYC-208ENST00000641036 567 ntBASIC30.33■■■□□ 2.45
CDC42BPAQ5VT25 ERF-202ENST00000440177 2032 ntTSL 2 BASIC30.33■■■□□ 2.45
CDC42BPAQ5VT25 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CDC42BPAQ5VT25 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC30.33■■■□□ 2.45
CDC42BPAQ5VT25 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms