Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 AC060766.5-201ENST00000590539 871 ntBASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 AC092368.3-202ENST00000574180 1591 ntBASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PTPN20Q4JDL3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN20Q4JDL3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN20Q4JDL3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN20Q4JDL3 AC006557.6-201ENST00000623071 864 ntBASIC21■□□□□ 0.95
PTPN20Q4JDL3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN20Q4JDL3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PTPN20Q4JDL3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC21■□□□□ 0.95
PTPN20Q4JDL3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21■□□□□ 0.95
PTPN20Q4JDL3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 PNMA6B-201ENST00000538162 1200 ntBASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PTPN20Q4JDL3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 AC125437.2-201ENST00000625180 2167 ntBASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.98■□□□□ 0.95
PTPN20Q4JDL3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 AL390719.1-204ENST00000412397 1219 ntBASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.97■□□□□ 0.95
PTPN20Q4JDL3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PTPN20Q4JDL3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms