Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH15P55291 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDH15P55291 AL138781.2-201ENST00000617896 1843 ntBASIC18.52■□□□□ 0.56
CDH15P55291 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH15P55291 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDH15P55291 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH15P55291 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH15P55291 AC034268.1-201ENST00000441047 882 ntBASIC18.52■□□□□ 0.56
CDH15P55291 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.52■□□□□ 0.56
CDH15P55291 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.52■□□□□ 0.56
CDH15P55291 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDH15P55291 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.52■□□□□ 0.55
CDH15P55291 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH15P55291 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH15P55291 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDH15P55291 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDH15P55291 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDH15P55291 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH15P55291 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH15P55291 YBX1P1-201ENST00000445822 960 ntBASIC18.51■□□□□ 0.55
CDH15P55291 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
CDH15P55291 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDH15P55291 IGHV3-19-201ENST00000521488 291 ntBASIC18.51■□□□□ 0.55
CDH15P55291 AP005435.1-201ENST00000529293 1178 ntBASIC18.51■□□□□ 0.55
CDH15P55291 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.51■□□□□ 0.55
CDH15P55291 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH15P55291 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
CDH15P55291 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDH15P55291 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH15P55291 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH15P55291 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.51■□□□□ 0.55
CDH15P55291 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDH15P55291 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CDH15P55291 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.51■□□□□ 0.55
CDH15P55291 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDH15P55291 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH15P55291 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDH15P55291 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH15P55291 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH15P55291 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH15P55291 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH15P55291 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH15P55291 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH15P55291 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH15P55291 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH15P55291 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH15P55291 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CDH15P55291 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH15P55291 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 AC104581.1-202ENST00000635932 2618 ntBASIC18.49■□□□□ 0.55
CDH15P55291 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH15P55291 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH15P55291 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CDH15P55291 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH15P55291 AL358852.1-201ENST00000623174 1268 ntBASIC18.49■□□□□ 0.55
CDH15P55291 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH15P55291 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDH15P55291 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH15P55291 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH15P55291 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH15P55291 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH15P55291 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDH15P55291 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH15P55291 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CDH15P55291 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH15P55291 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDH15P55291 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDH15P55291 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms