Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
EMP3P54852 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
EMP3P54852 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
EMP3P54852 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.31■□□□□ 0.68
EMP3P54852 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.31■□□□□ 0.68
EMP3P54852 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.31■□□□□ 0.68
EMP3P54852 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
EMP3P54852 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.31■□□□□ 0.68
EMP3P54852 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
EMP3P54852 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.3■□□□□ 0.68
EMP3P54852 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.3■□□□□ 0.68
EMP3P54852 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.3■□□□□ 0.68
EMP3P54852 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
EMP3P54852 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
EMP3P54852 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC19.3■□□□□ 0.68
EMP3P54852 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.3■□□□□ 0.68
EMP3P54852 AC060766.5-201ENST00000590539 871 ntBASIC19.3■□□□□ 0.68
EMP3P54852 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EMP3P54852 PLK5-205ENST00000642079 1969 ntBASIC19.3■□□□□ 0.68
EMP3P54852 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.3■□□□□ 0.68
EMP3P54852 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
EMP3P54852 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.29■□□□□ 0.68
EMP3P54852 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.29■□□□□ 0.68
EMP3P54852 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.29■□□□□ 0.68
EMP3P54852 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.29■□□□□ 0.68
EMP3P54852 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
EMP3P54852 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.29■□□□□ 0.68
EMP3P54852 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.29■□□□□ 0.68
EMP3P54852 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.29■□□□□ 0.68
EMP3P54852 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.29■□□□□ 0.68
EMP3P54852 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.29■□□□□ 0.68
EMP3P54852 RN7SL602P-201ENST00000578326 324 ntBASIC19.29■□□□□ 0.68
EMP3P54852 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.29■□□□□ 0.68
EMP3P54852 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.29■□□□□ 0.68
EMP3P54852 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
EMP3P54852 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
EMP3P54852 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.29■□□□□ 0.68
EMP3P54852 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.29■□□□□ 0.68
EMP3P54852 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EMP3P54852 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
EMP3P54852 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
EMP3P54852 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
EMP3P54852 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 AC006128.1-201ENST00000624704 1661 ntBASIC19.28■□□□□ 0.68
EMP3P54852 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
EMP3P54852 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.28■□□□□ 0.68
EMP3P54852 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.28■□□□□ 0.68
EMP3P54852 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
EMP3P54852 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.28■□□□□ 0.68
EMP3P54852 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 GABARAPL3-202ENST00000624044 1851 ntBASIC19.28■□□□□ 0.68
EMP3P54852 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EMP3P54852 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.28■□□□□ 0.68
EMP3P54852 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms