Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SMSP52788 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMSP52788 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.63■□□□□ 0.57
SMSP52788 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 AC026366.1-201ENST00000488803 879 ntBASIC18.63■□□□□ 0.57
SMSP52788 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
SMSP52788 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.63■□□□□ 0.57
SMSP52788 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.63■□□□□ 0.57
SMSP52788 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.63■□□□□ 0.57
SMSP52788 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.63■□□□□ 0.57
SMSP52788 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMSP52788 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.62■□□□□ 0.57
SMSP52788 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.62■□□□□ 0.57
SMSP52788 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.62■□□□□ 0.57
SMSP52788 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.62■□□□□ 0.57
SMSP52788 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMSP52788 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.62■□□□□ 0.57
SMSP52788 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SMSP52788 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.61■□□□□ 0.57
SMSP52788 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.61■□□□□ 0.57
SMSP52788 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.61■□□□□ 0.57
SMSP52788 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMSP52788 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SMSP52788 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SMSP52788 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 AC061975.6-201ENST00000579045 1553 ntBASIC18.61■□□□□ 0.57
SMSP52788 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.61■□□□□ 0.57
SMSP52788 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.61■□□□□ 0.57
SMSP52788 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.61■□□□□ 0.57
SMSP52788 UNC93B5-201ENST00000530315 699 ntBASIC18.61■□□□□ 0.57
SMSP52788 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SMSP52788 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.61■□□□□ 0.57
SMSP52788 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.61■□□□□ 0.57
SMSP52788 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMSP52788 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.61■□□□□ 0.57
SMSP52788 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SMSP52788 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
SMSP52788 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMSP52788 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
SMSP52788 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SMSP52788 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.6■□□□□ 0.57
SMSP52788 UNC93B4-201ENST00000505679 747 ntBASIC18.6■□□□□ 0.57
SMSP52788 AP003097.1-201ENST00000530657 1135 ntBASIC18.6■□□□□ 0.57
SMSP52788 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.6■□□□□ 0.57
SMSP52788 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.6■□□□□ 0.57
SMSP52788 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMSP52788 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMSP52788 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.59■□□□□ 0.57
SMSP52788 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SMSP52788 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SMSP52788 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SMSP52788 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SMSP52788 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.59■□□□□ 0.57
SMSP52788 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.59■□□□□ 0.57
SMSP52788 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.59■□□□□ 0.57
SMSP52788 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.59■□□□□ 0.57
SMSP52788 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms