Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF140P52738 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF140P52738 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZNF140P52738 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF140P52738 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF140P52738 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF140P52738 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF140P52738 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF140P52738 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.88■□□□□ 0.77
ZNF140P52738 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF140P52738 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF140P52738 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF140P52738 AL390719.1-204ENST00000412397 1219 ntBASIC19.88■□□□□ 0.77
ZNF140P52738 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF140P52738 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.88■□□□□ 0.77
ZNF140P52738 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF140P52738 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF140P52738 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.88■□□□□ 0.77
ZNF140P52738 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF140P52738 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF140P52738 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
ZNF140P52738 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ZNF140P52738 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZNF140P52738 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
ZNF140P52738 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF140P52738 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF140P52738 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF140P52738 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
ZNF140P52738 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.87■□□□□ 0.77
ZNF140P52738 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.87■□□□□ 0.77
ZNF140P52738 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.87■□□□□ 0.77
ZNF140P52738 AC006557.6-201ENST00000623071 864 ntBASIC19.87■□□□□ 0.77
ZNF140P52738 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF140P52738 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF140P52738 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF140P52738 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF140P52738 PHGDH-210ENST00000641115 1638 ntBASIC19.87■□□□□ 0.77
ZNF140P52738 AC009237.14-201ENST00000609975 1594 ntBASIC19.87■□□□□ 0.77
ZNF140P52738 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZNF140P52738 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF140P52738 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF140P52738 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.86■□□□□ 0.77
ZNF140P52738 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF140P52738 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.86■□□□□ 0.77
ZNF140P52738 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.86■□□□□ 0.77
ZNF140P52738 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZNF140P52738 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ZNF140P52738 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ZNF140P52738 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF140P52738 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
ZNF140P52738 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF140P52738 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF140P52738 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF140P52738 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF140P52738 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ZNF140P52738 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.85■□□□□ 0.77
ZNF140P52738 AC125437.2-201ENST00000625180 2167 ntBASIC19.85■□□□□ 0.77
ZNF140P52738 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.85■□□□□ 0.77
ZNF140P52738 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF140P52738 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
ZNF140P52738 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZNF140P52738 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 AP001271.2-201ENST00000624018 1556 ntBASIC19.84■□□□□ 0.77
ZNF140P52738 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ZNF140P52738 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF140P52738 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF140P52738 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZNF140P52738 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.84■□□□□ 0.77
ZNF140P52738 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF140P52738 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ZNF140P52738 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.84■□□□□ 0.77
ZNF140P52738 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ZNF140P52738 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ZNF140P52738 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZNF140P52738 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.83■□□□□ 0.77
ZNF140P52738 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF140P52738 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ZNF140P52738 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZNF140P52738 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms