Protein–RNA interactions for Protein: P46063

RECQL, ATP-dependent DNA helicase Q1, humanhuman

Predicted RBP Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RECQLP46063 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RECQLP46063 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RECQLP46063 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RECQLP46063 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RECQLP46063 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.21■□□□□ 0.83
RECQLP46063 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.21■□□□□ 0.83
RECQLP46063 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.21■□□□□ 0.83
RECQLP46063 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RECQLP46063 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.21■□□□□ 0.83
RECQLP46063 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.21■□□□□ 0.83
RECQLP46063 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.21■□□□□ 0.83
RECQLP46063 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.21■□□□□ 0.83
RECQLP46063 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.21■□□□□ 0.83
RECQLP46063 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.21■□□□□ 0.83
RECQLP46063 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 AL121829.2-201ENST00000620908 328 ntBASIC20.21■□□□□ 0.83
RECQLP46063 AL023875.1-201ENST00000640777 796 ntBASIC20.21■□□□□ 0.83
RECQLP46063 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RECQLP46063 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RECQLP46063 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RECQLP46063 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RECQLP46063 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.2■□□□□ 0.82
RECQLP46063 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.2■□□□□ 0.82
RECQLP46063 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.2■□□□□ 0.82
RECQLP46063 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.2■□□□□ 0.82
RECQLP46063 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.2■□□□□ 0.82
RECQLP46063 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
RECQLP46063 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RECQLP46063 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RECQLP46063 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 AC124283.5-201ENST00000624661 1809 ntBASIC20.19■□□□□ 0.82
RECQLP46063 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RECQLP46063 AC093827.2-201ENST00000512654 315 ntBASIC20.19■□□□□ 0.82
RECQLP46063 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.19■□□□□ 0.82
RECQLP46063 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
RECQLP46063 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.19■□□□□ 0.82
RECQLP46063 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.19■□□□□ 0.82
RECQLP46063 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.19■□□□□ 0.82
RECQLP46063 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RECQLP46063 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RECQLP46063 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.19■□□□□ 0.82
RECQLP46063 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
RECQLP46063 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RECQLP46063 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.19■□□□□ 0.82
RECQLP46063 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.19■□□□□ 0.82
RECQLP46063 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RECQLP46063 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
RECQLP46063 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RECQLP46063 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RECQLP46063 KRASP1-201ENST00000407852 552 ntBASIC20.18■□□□□ 0.82
RECQLP46063 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.18■□□□□ 0.82
RECQLP46063 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.18■□□□□ 0.82
RECQLP46063 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
RECQLP46063 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.18■□□□□ 0.82
RECQLP46063 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.18■□□□□ 0.82
RECQLP46063 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.18■□□□□ 0.82
RECQLP46063 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RECQLP46063 SMG8-203ENST00000578922 2178 ntBASIC20.18■□□□□ 0.82
RECQLP46063 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RECQLP46063 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RECQLP46063 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RECQLP46063 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RECQLP46063 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RECQLP46063 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RECQLP46063 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RECQLP46063 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RECQLP46063 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.17■□□□□ 0.82
RECQLP46063 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms