Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.3■□□□□ 0.2
NKX2-1P43699 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NKX2-1P43699 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-1P43699 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.3■□□□□ 0.2
NKX2-1P43699 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NKX2-1P43699 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NKX2-1P43699 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
NKX2-1P43699 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NKX2-1P43699 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.29■□□□□ 0.2
NKX2-1P43699 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-1P43699 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.29■□□□□ 0.2
NKX2-1P43699 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.29■□□□□ 0.2
NKX2-1P43699 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-1P43699 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-1P43699 AC120498.10-201ENST00000621827 505 ntBASIC16.29■□□□□ 0.2
NKX2-1P43699 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
NKX2-1P43699 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-1P43699 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NKX2-1P43699 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.29■□□□□ 0.2
NKX2-1P43699 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NKX2-1P43699 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-1P43699 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 KRT8P36-201ENST00000489121 1440 ntBASIC16.28■□□□□ 0.2
NKX2-1P43699 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-1P43699 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.28■□□□□ 0.2
NKX2-1P43699 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.28■□□□□ 0.2
NKX2-1P43699 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.28■□□□□ 0.2
NKX2-1P43699 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
NKX2-1P43699 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NKX2-1P43699 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NKX2-1P43699 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-1P43699 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-1P43699 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-1P43699 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NKX2-1P43699 TSPY26P-201ENST00000476365 1326 ntBASIC16.27■□□□□ 0.2
NKX2-1P43699 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-1P43699 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
NKX2-1P43699 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NKX2-1P43699 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-1P43699 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NKX2-1P43699 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.27■□□□□ 0.2
NKX2-1P43699 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.27■□□□□ 0.2
NKX2-1P43699 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
NKX2-1P43699 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NKX2-1P43699 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-1P43699 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.27■□□□□ 0.19
NKX2-1P43699 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NKX2-1P43699 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-1P43699 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-1P43699 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
NKX2-1P43699 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-1P43699 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-1P43699 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.27■□□□□ 0.19
NKX2-1P43699 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.27■□□□□ 0.19
NKX2-1P43699 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.27■□□□□ 0.19
NKX2-1P43699 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NKX2-1P43699 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-1P43699 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NKX2-1P43699 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.26■□□□□ 0.19
NKX2-1P43699 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms