Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.36□□□□□ -0.43
PDE6GP18545 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6GP18545 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC12.36□□□□□ -0.43
PDE6GP18545 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
PDE6GP18545 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
PDE6GP18545 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC12.36□□□□□ -0.43
PDE6GP18545 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC12.36□□□□□ -0.43
PDE6GP18545 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
PDE6GP18545 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC12.36□□□□□ -0.43
PDE6GP18545 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
PDE6GP18545 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
PDE6GP18545 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.36□□□□□ -0.43
PDE6GP18545 AP006587.3-201ENST00000525742 1516 ntBASIC12.36□□□□□ -0.43
PDE6GP18545 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
PDE6GP18545 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PDE6GP18545 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
PDE6GP18545 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC12.35□□□□□ -0.43
PDE6GP18545 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
PDE6GP18545 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
PDE6GP18545 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC12.35□□□□□ -0.43
PDE6GP18545 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 AC135050.7-201ENST00000624508 2218 ntBASIC12.35□□□□□ -0.43
PDE6GP18545 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC12.35□□□□□ -0.43
PDE6GP18545 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PDE6GP18545 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC12.35□□□□□ -0.43
PDE6GP18545 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.34□□□□□ -0.43
PDE6GP18545 AC007613.1-201ENST00000572811 2597 ntBASIC12.34□□□□□ -0.43
PDE6GP18545 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 STX4-202ENST00000394998 1498 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC12.34□□□□□ -0.43
PDE6GP18545 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
PDE6GP18545 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC12.34□□□□□ -0.43
PDE6GP18545 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 AC139795.1-202ENST00000500444 432 ntBASIC12.34□□□□□ -0.43
PDE6GP18545 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PDE6GP18545 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC12.34□□□□□ -0.43
PDE6GP18545 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PDE6GP18545 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PDE6GP18545 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
PDE6GP18545 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms