Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC2P18074 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
ERCC2P18074 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC2P18074 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC2P18074 AC060766.5-201ENST00000590539 871 ntBASIC20.54■□□□□ 0.88
ERCC2P18074 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ERCC2P18074 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
ERCC2P18074 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC2P18074 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 AC092368.3-202ENST00000574180 1591 ntBASIC20.54■□□□□ 0.88
ERCC2P18074 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC2P18074 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC2P18074 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC2P18074 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC2P18074 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ERCC2P18074 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
ERCC2P18074 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 AL390719.1-204ENST00000412397 1219 ntBASIC20.53■□□□□ 0.88
ERCC2P18074 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.53■□□□□ 0.88
ERCC2P18074 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.53■□□□□ 0.88
ERCC2P18074 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.53■□□□□ 0.88
ERCC2P18074 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.53■□□□□ 0.88
ERCC2P18074 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.53■□□□□ 0.88
ERCC2P18074 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ERCC2P18074 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
ERCC2P18074 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.53■□□□□ 0.88
ERCC2P18074 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ERCC2P18074 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.53■□□□□ 0.88
ERCC2P18074 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ERCC2P18074 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC2P18074 SLC25A24-204ENST00000569674 2357 ntBASIC20.52■□□□□ 0.88
ERCC2P18074 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC2P18074 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.52■□□□□ 0.88
ERCC2P18074 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC2P18074 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC2P18074 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.52■□□□□ 0.88
ERCC2P18074 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC2P18074 PNMA6B-201ENST00000538162 1200 ntBASIC20.52■□□□□ 0.88
ERCC2P18074 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.52■□□□□ 0.88
ERCC2P18074 AC006557.6-201ENST00000623071 864 ntBASIC20.52■□□□□ 0.88
ERCC2P18074 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC2P18074 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ERCC2P18074 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.52■□□□□ 0.88
ERCC2P18074 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.51■□□□□ 0.87
ERCC2P18074 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.51■□□□□ 0.87
ERCC2P18074 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.51■□□□□ 0.87
ERCC2P18074 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.51■□□□□ 0.87
ERCC2P18074 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.51■□□□□ 0.87
ERCC2P18074 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.51■□□□□ 0.87
ERCC2P18074 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.51■□□□□ 0.87
ERCC2P18074 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ERCC2P18074 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.51■□□□□ 0.87
ERCC2P18074 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
ERCC2P18074 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.51■□□□□ 0.87
ERCC2P18074 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ERCC2P18074 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ERCC2P18074 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.5■□□□□ 0.87
ERCC2P18074 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.5■□□□□ 0.87
ERCC2P18074 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ERCC2P18074 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms