Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM17P0DL12 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.82□□□□□ -0.04
SMIM17P0DL12 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.82□□□□□ -0.04
SMIM17P0DL12 AC005082.1-201ENST00000413042 2259 ntBASIC14.82□□□□□ -0.04
SMIM17P0DL12 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMIM17P0DL12 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.82□□□□□ -0.04
SMIM17P0DL12 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.82□□□□□ -0.04
SMIM17P0DL12 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.82□□□□□ -0.04
SMIM17P0DL12 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 AC008764.7-201ENST00000593779 1081 ntBASIC14.81□□□□□ -0.04
SMIM17P0DL12 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.81□□□□□ -0.04
SMIM17P0DL12 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM17P0DL12 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 AC116562.4-201ENST00000641316 2276 ntBASIC14.8□□□□□ -0.04
SMIM17P0DL12 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 AL136162.1-201ENST00000607711 1078 ntBASIC14.8□□□□□ -0.04
SMIM17P0DL12 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 TSPY26P-201ENST00000476365 1326 ntBASIC14.8□□□□□ -0.04
SMIM17P0DL12 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SMIM17P0DL12 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM17P0DL12 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SMIM17P0DL12 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SMIM17P0DL12 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SMIM17P0DL12 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SMIM17P0DL12 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM17P0DL12 POU5F1P4-201ENST00000413175 1085 ntBASIC14.79□□□□□ -0.04
SMIM17P0DL12 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.79□□□□□ -0.04
SMIM17P0DL12 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.79□□□□□ -0.04
SMIM17P0DL12 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SMIM17P0DL12 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms