Protein–RNA interactions for Protein: O75462

CRLF1, Cytokine receptor-like factor 1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF1O75462 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.14■□□□□ 0.17
CRLF1O75462 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.14■□□□□ 0.17
CRLF1O75462 AL445675.2-201ENST00000620291 557 ntBASIC16.14■□□□□ 0.17
CRLF1O75462 AL138966.2-201ENST00000621997 464 ntBASIC16.14■□□□□ 0.17
CRLF1O75462 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.14■□□□□ 0.17
CRLF1O75462 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CRLF1O75462 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CRLF1O75462 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CRLF1O75462 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.14■□□□□ 0.17
CRLF1O75462 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CRLF1O75462 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC16.14■□□□□ 0.17
CRLF1O75462 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CRLF1O75462 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.14■□□□□ 0.17
CRLF1O75462 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
CRLF1O75462 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CRLF1O75462 FAM99A-202ENST00000538190 1989 ntBASIC16.13■□□□□ 0.17
CRLF1O75462 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.13■□□□□ 0.17
CRLF1O75462 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.13■□□□□ 0.17
CRLF1O75462 COX11P1-201ENST00000489116 835 ntBASIC16.13■□□□□ 0.17
CRLF1O75462 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.13■□□□□ 0.17
CRLF1O75462 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.13■□□□□ 0.17
CRLF1O75462 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.13■□□□□ 0.17
CRLF1O75462 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.13■□□□□ 0.17
CRLF1O75462 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.13■□□□□ 0.17
CRLF1O75462 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.13■□□□□ 0.17
CRLF1O75462 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CRLF1O75462 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CRLF1O75462 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CRLF1O75462 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.12■□□□□ 0.17
CRLF1O75462 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CRLF1O75462 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CRLF1O75462 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
CRLF1O75462 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.12■□□□□ 0.17
CRLF1O75462 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.12■□□□□ 0.17
CRLF1O75462 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.12■□□□□ 0.17
CRLF1O75462 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.12■□□□□ 0.17
CRLF1O75462 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.12■□□□□ 0.17
CRLF1O75462 CLEC4GP1-201ENST00000596555 870 ntBASIC16.12■□□□□ 0.17
CRLF1O75462 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CRLF1O75462 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
CRLF1O75462 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF1O75462 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF1O75462 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CRLF1O75462 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF1O75462 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.11■□□□□ 0.17
CRLF1O75462 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF1O75462 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.11■□□□□ 0.17
CRLF1O75462 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CRLF1O75462 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.11■□□□□ 0.17
CRLF1O75462 AC116562.4-202ENST00000641738 218 ntBASIC16.11■□□□□ 0.17
CRLF1O75462 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CRLF1O75462 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.1■□□□□ 0.17
CRLF1O75462 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CRLF1O75462 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms