Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDCD6O75340 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDCD6O75340 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.82■□□□□ 0.28
PDCD6O75340 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.82■□□□□ 0.28
PDCD6O75340 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.82■□□□□ 0.28
PDCD6O75340 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDCD6O75340 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.82■□□□□ 0.28
PDCD6O75340 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PDCD6O75340 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDCD6O75340 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDCD6O75340 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PDCD6O75340 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.82■□□□□ 0.28
PDCD6O75340 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDCD6O75340 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDCD6O75340 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.82■□□□□ 0.28
PDCD6O75340 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PDCD6O75340 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.81■□□□□ 0.28
PDCD6O75340 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.81■□□□□ 0.28
PDCD6O75340 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDCD6O75340 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PDCD6O75340 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.81■□□□□ 0.28
PDCD6O75340 AC018445.3-201ENST00000624177 1945 ntBASIC16.81■□□□□ 0.28
PDCD6O75340 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.81■□□□□ 0.28
PDCD6O75340 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.81■□□□□ 0.28
PDCD6O75340 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.81■□□□□ 0.28
PDCD6O75340 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.81■□□□□ 0.28
PDCD6O75340 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PDCD6O75340 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDCD6O75340 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDCD6O75340 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDCD6O75340 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.81■□□□□ 0.28
PDCD6O75340 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.81■□□□□ 0.28
PDCD6O75340 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDCD6O75340 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PDCD6O75340 AC087289.5-201ENST00000586076 3175 ntBASIC16.81■□□□□ 0.28
PDCD6O75340 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PDCD6O75340 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PDCD6O75340 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
PDCD6O75340 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PDCD6O75340 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PDCD6O75340 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PDCD6O75340 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.8■□□□□ 0.28
PDCD6O75340 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PDCD6O75340 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.8■□□□□ 0.28
PDCD6O75340 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 RARRES2P4-201ENST00000514074 484 ntBASIC16.8■□□□□ 0.28
PDCD6O75340 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.8■□□□□ 0.28
PDCD6O75340 AC137761.2-201ENST00000561729 223 ntBASIC16.8■□□□□ 0.28
PDCD6O75340 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.8■□□□□ 0.28
PDCD6O75340 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.8■□□□□ 0.28
PDCD6O75340 AC145350.3-201ENST00000569033 163 ntBASIC16.8■□□□□ 0.28
PDCD6O75340 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.8■□□□□ 0.28
PDCD6O75340 AL031963.3-201ENST00000606441 850 ntBASIC16.8■□□□□ 0.28
PDCD6O75340 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PDCD6O75340 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PDCD6O75340 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.79■□□□□ 0.28
PDCD6O75340 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 AC005332.7-201ENST00000614046 2005 ntBASIC16.79■□□□□ 0.28
PDCD6O75340 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.79■□□□□ 0.28
PDCD6O75340 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PDCD6O75340 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PDCD6O75340 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PDCD6O75340 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDCD6O75340 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDCD6O75340 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PDCD6O75340 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDCD6O75340 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PDCD6O75340 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PDCD6O75340 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDCD6O75340 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.78■□□□□ 0.28
PDCD6O75340 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PDCD6O75340 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.78■□□□□ 0.28
PDCD6O75340 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms