Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC073195.1-201ENST00000607241 877 ntBASIC23.87■■□□□ 1.41
FOXN1O15353 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
FOXN1O15353 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.87■■□□□ 1.41
FOXN1O15353 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC23.87■■□□□ 1.41
FOXN1O15353 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FOXN1O15353 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
FOXN1O15353 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
FOXN1O15353 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
FOXN1O15353 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 AC063952.2-201ENST00000498792 1227 ntBASIC23.86■■□□□ 1.41
FOXN1O15353 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.86■■□□□ 1.41
FOXN1O15353 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC23.86■■□□□ 1.41
FOXN1O15353 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.86■■□□□ 1.41
FOXN1O15353 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.86■■□□□ 1.41
FOXN1O15353 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.86■■□□□ 1.41
FOXN1O15353 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.86■■□□□ 1.41
FOXN1O15353 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
FOXN1O15353 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXN1O15353 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
FOXN1O15353 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
FOXN1O15353 AL031133.1-201ENST00000406807 723 ntBASIC23.85■■□□□ 1.41
FOXN1O15353 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC23.85■■□□□ 1.41
FOXN1O15353 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.85■■□□□ 1.41
FOXN1O15353 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC23.85■■□□□ 1.41
FOXN1O15353 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.85■■□□□ 1.41
FOXN1O15353 CLN6-204ENST00000564752 900 ntTSL 3 BASIC23.85■■□□□ 1.41
FOXN1O15353 LINC01238-205ENST00000567549 1107 ntBASIC23.85■■□□□ 1.41
FOXN1O15353 AC005829.2-201ENST00000571422 1056 ntBASIC23.85■■□□□ 1.41
FOXN1O15353 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
FOXN1O15353 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.85■■□□□ 1.41
FOXN1O15353 CLN6-214ENST00000636314 442 ntTSL 3 BASIC23.85■■□□□ 1.41
FOXN1O15353 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.85■■□□□ 1.41
FOXN1O15353 MYC-208ENST00000641036 567 ntBASIC23.85■■□□□ 1.41
FOXN1O15353 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FOXN1O15353 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC23.84■■□□□ 1.41
FOXN1O15353 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
FOXN1O15353 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
FOXN1O15353 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.84■■□□□ 1.41
FOXN1O15353 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN1O15353 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.84■■□□□ 1.41
FOXN1O15353 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN1O15353 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN1O15353 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN1O15353 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.84■■□□□ 1.41
FOXN1O15353 AP000347.1-202ENST00000435868 847 ntBASIC23.84■■□□□ 1.41
FOXN1O15353 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC23.84■■□□□ 1.41
FOXN1O15353 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.84■■□□□ 1.41
FOXN1O15353 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC23.84■■□□□ 1.41
FOXN1O15353 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
FOXN1O15353 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN1O15353 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN1O15353 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FOXN1O15353 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
FOXN1O15353 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
FOXN1O15353 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FOXN1O15353 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.83■■□□□ 1.41
FOXN1O15353 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.83■■□□□ 1.41
FOXN1O15353 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
FOXN1O15353 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.83■■□□□ 1.41
FOXN1O15353 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FOXN1O15353 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FOXN1O15353 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.83■■□□□ 1.41
FOXN1O15353 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC23.83■■□□□ 1.41
FOXN1O15353 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.83■■□□□ 1.41
FOXN1O15353 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
FOXN1O15353 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.83■■□□□ 1.4
FOXN1O15353 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.82■■□□□ 1.4
FOXN1O15353 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.82■■□□□ 1.4
FOXN1O15353 CLEC4GP1-201ENST00000596555 870 ntBASIC23.82■■□□□ 1.4
FOXN1O15353 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FOXN1O15353 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
FOXN1O15353 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FOXN1O15353 CYP21A1P-202ENST00000354927 1481 ntBASIC23.81■■□□□ 1.4
FOXN1O15353 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
FOXN1O15353 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXN1O15353 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FOXN1O15353 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
FOXN1O15353 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC23.81■■□□□ 1.4
FOXN1O15353 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
FOXN1O15353 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
FOXN1O15353 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC23.81■■□□□ 1.4
FOXN1O15353 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.81■■□□□ 1.4
FOXN1O15353 KRT16P5-201ENST00000455284 522 ntBASIC23.81■■□□□ 1.4
FOXN1O15353 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.81■■□□□ 1.4
FOXN1O15353 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
FOXN1O15353 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms