Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.14■□□□□ 0.97
TRANK1O15050 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRANK1O15050 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRANK1O15050 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRANK1O15050 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.14■□□□□ 0.97
TRANK1O15050 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRANK1O15050 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.14■□□□□ 0.97
TRANK1O15050 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRANK1O15050 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRANK1O15050 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.13■□□□□ 0.97
TRANK1O15050 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRANK1O15050 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.13■□□□□ 0.97
TRANK1O15050 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRANK1O15050 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRANK1O15050 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRANK1O15050 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRANK1O15050 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRANK1O15050 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.13■□□□□ 0.97
TRANK1O15050 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.13■□□□□ 0.97
TRANK1O15050 AC069148.1-201ENST00000608741 768 ntBASIC21.13■□□□□ 0.97
TRANK1O15050 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TRANK1O15050 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRANK1O15050 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.12■□□□□ 0.97
TRANK1O15050 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.12■□□□□ 0.97
TRANK1O15050 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRANK1O15050 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.12■□□□□ 0.97
TRANK1O15050 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.12■□□□□ 0.97
TRANK1O15050 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRANK1O15050 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
TRANK1O15050 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRANK1O15050 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.11■□□□□ 0.97
TRANK1O15050 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRANK1O15050 AC093458.2-201ENST00000623150 629 ntBASIC21.11■□□□□ 0.97
TRANK1O15050 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.11■□□□□ 0.97
TRANK1O15050 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRANK1O15050 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.11■□□□□ 0.97
TRANK1O15050 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRANK1O15050 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRANK1O15050 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
TRANK1O15050 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.11■□□□□ 0.97
TRANK1O15050 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.1■□□□□ 0.97
TRANK1O15050 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.1■□□□□ 0.97
TRANK1O15050 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.1■□□□□ 0.97
TRANK1O15050 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.1■□□□□ 0.97
TRANK1O15050 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.1■□□□□ 0.97
TRANK1O15050 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.1■□□□□ 0.97
TRANK1O15050 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.1■□□□□ 0.97
TRANK1O15050 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.1■□□□□ 0.97
TRANK1O15050 AC083849.1-201ENST00000615227 514 ntBASIC21.1■□□□□ 0.97
TRANK1O15050 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
TRANK1O15050 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TRANK1O15050 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.1■□□□□ 0.97
TRANK1O15050 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRANK1O15050 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TRANK1O15050 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.1■□□□□ 0.97
TRANK1O15050 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRANK1O15050 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRANK1O15050 CCR12P-201ENST00000446203 998 ntBASIC21.09■□□□□ 0.97
TRANK1O15050 AC092647.4-201ENST00000457211 535 ntBASIC21.09■□□□□ 0.97
TRANK1O15050 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.09■□□□□ 0.97
TRANK1O15050 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRANK1O15050 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.09■□□□□ 0.97
TRANK1O15050 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRANK1O15050 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRANK1O15050 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
TRANK1O15050 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRANK1O15050 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRANK1O15050 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRANK1O15050 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRANK1O15050 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRANK1O15050 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.09■□□□□ 0.97
TRANK1O15050 AL121603.2-201ENST00000557373 2117 ntBASIC21.09■□□□□ 0.97
TRANK1O15050 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TRANK1O15050 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
TRANK1O15050 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.08■□□□□ 0.97
TRANK1O15050 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRANK1O15050 RCC2P6-201ENST00000526625 1557 ntBASIC21.08■□□□□ 0.97
TRANK1O15050 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC21.08■□□□□ 0.97
TRANK1O15050 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRANK1O15050 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.08■□□□□ 0.97
TRANK1O15050 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRANK1O15050 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TRANK1O15050 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRANK1O15050 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.08■□□□□ 0.97
TRANK1O15050 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.08■□□□□ 0.97
TRANK1O15050 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRANK1O15050 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRANK1O15050 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRANK1O15050 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRANK1O15050 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRANK1O15050 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRANK1O15050 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms