Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIC1O00299 AC009237.14-201ENST00000609975 1594 ntBASIC18.78■□□□□ 0.6
CLIC1O00299 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC1O00299 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLIC1O00299 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLIC1O00299 AC034268.1-201ENST00000441047 882 ntBASIC18.78■□□□□ 0.6
CLIC1O00299 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLIC1O00299 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIC1O00299 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC1O00299 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC1O00299 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC1O00299 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIC1O00299 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 AC098818.2-201ENST00000564925 2320 ntBASIC18.77■□□□□ 0.6
CLIC1O00299 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIC1O00299 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 KRT18P11-201ENST00000435214 1283 ntBASIC18.77■□□□□ 0.6
CLIC1O00299 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIC1O00299 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIC1O00299 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIC1O00299 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIC1O00299 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLIC1O00299 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC1O00299 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLIC1O00299 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC1O00299 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC1O00299 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC1O00299 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC1O00299 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC1O00299 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLIC1O00299 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CLIC1O00299 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
CLIC1O00299 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
CLIC1O00299 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 MCRIP2P1-201ENST00000394346 511 ntBASIC18.76■□□□□ 0.59
CLIC1O00299 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLIC1O00299 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.76■□□□□ 0.59
CLIC1O00299 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLIC1O00299 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.76■□□□□ 0.59
CLIC1O00299 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC1O00299 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CLIC1O00299 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CLIC1O00299 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIC1O00299 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.75■□□□□ 0.59
CLIC1O00299 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.75■□□□□ 0.59
CLIC1O00299 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.75■□□□□ 0.59
CLIC1O00299 AC100791.3-201ENST00000617619 330 ntBASIC18.75■□□□□ 0.59
CLIC1O00299 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CLIC1O00299 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.75■□□□□ 0.59
CLIC1O00299 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CLIC1O00299 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
CLIC1O00299 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.75■□□□□ 0.59
CLIC1O00299 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLIC1O00299 KRT16P6-202ENST00000425692 1426 ntBASIC18.74■□□□□ 0.59
CLIC1O00299 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.74■□□□□ 0.59
CLIC1O00299 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CLIC1O00299 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLIC1O00299 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CLIC1O00299 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.74■□□□□ 0.59
CLIC1O00299 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.74■□□□□ 0.59
CLIC1O00299 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms