Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.15■□□□□ 0.82
AP3B1O00203 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.15■□□□□ 0.82
AP3B1O00203 AC080038.1-201ENST00000611274 1154 ntBASIC20.15■□□□□ 0.82
AP3B1O00203 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3B1O00203 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.15■□□□□ 0.82
AP3B1O00203 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP3B1O00203 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
AP3B1O00203 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
AP3B1O00203 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.15■□□□□ 0.82
AP3B1O00203 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AP3B1O00203 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
AP3B1O00203 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.14■□□□□ 0.82
AP3B1O00203 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
AP3B1O00203 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
AP3B1O00203 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.14■□□□□ 0.81
AP3B1O00203 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.14■□□□□ 0.81
AP3B1O00203 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.14■□□□□ 0.81
AP3B1O00203 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.14■□□□□ 0.81
AP3B1O00203 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 LSM12P1-201ENST00000411836 588 ntBASIC20.14■□□□□ 0.81
AP3B1O00203 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.14■□□□□ 0.81
AP3B1O00203 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
AP3B1O00203 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
AP3B1O00203 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.14■□□□□ 0.81
AP3B1O00203 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.14■□□□□ 0.81
AP3B1O00203 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.14■□□□□ 0.81
AP3B1O00203 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AP3B1O00203 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
AP3B1O00203 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
AP3B1O00203 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.13■□□□□ 0.81
AP3B1O00203 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.13■□□□□ 0.81
AP3B1O00203 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.13■□□□□ 0.81
AP3B1O00203 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP3B1O00203 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.13■□□□□ 0.81
AP3B1O00203 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
AP3B1O00203 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
AP3B1O00203 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.12■□□□□ 0.81
AP3B1O00203 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
AP3B1O00203 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.12■□□□□ 0.81
AP3B1O00203 AC093787.1-201ENST00000450396 207 ntBASIC20.12■□□□□ 0.81
AP3B1O00203 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
AP3B1O00203 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.12■□□□□ 0.81
AP3B1O00203 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.12■□□□□ 0.81
AP3B1O00203 AL137784.2-201ENST00000607332 1000 ntBASIC20.12■□□□□ 0.81
AP3B1O00203 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
AP3B1O00203 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
AP3B1O00203 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
AP3B1O00203 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP3B1O00203 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
AP3B1O00203 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.11■□□□□ 0.81
AP3B1O00203 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.11■□□□□ 0.81
AP3B1O00203 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.11■□□□□ 0.81
AP3B1O00203 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.11■□□□□ 0.81
AP3B1O00203 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 AC004911.1-201ENST00000416316 871 ntBASIC20.11■□□□□ 0.81
AP3B1O00203 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.11■□□□□ 0.81
AP3B1O00203 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.11■□□□□ 0.81
AP3B1O00203 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
AP3B1O00203 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
AP3B1O00203 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AP3B1O00203 AC073111.5-205ENST00000641717 521 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms