Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 AC093503.3-201ENST00000624917 2352 ntBASIC20.72■□□□□ 0.91
CCDC188H7C350 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CCDC188H7C350 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCDC188H7C350 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC188H7C350 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCDC188H7C350 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC188H7C350 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC188H7C350 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC188H7C350 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC188H7C350 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC188H7C350 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC188H7C350 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC188H7C350 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CCDC188H7C350 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC188H7C350 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CCDC188H7C350 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC188H7C350 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC188H7C350 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC188H7C350 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC188H7C350 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC188H7C350 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
CCDC188H7C350 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
CCDC188H7C350 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC188H7C350 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCDC188H7C350 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC188H7C350 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC188H7C350 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.7■□□□□ 0.9
CCDC188H7C350 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CCDC188H7C350 AL032819.2-201ENST00000624543 2162 ntBASIC20.7■□□□□ 0.9
CCDC188H7C350 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CCDC188H7C350 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 PTBP1P-201ENST00000554374 1601 ntBASIC20.7■□□□□ 0.9
CCDC188H7C350 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC188H7C350 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC188H7C350 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC188H7C350 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC188H7C350 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC188H7C350 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC188H7C350 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC188H7C350 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC188H7C350 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
CCDC188H7C350 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CCDC188H7C350 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC188H7C350 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.69■□□□□ 0.9
CCDC188H7C350 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC188H7C350 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CCDC188H7C350 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC188H7C350 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC188H7C350 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 KRT8P17-201ENST00000453110 1448 ntBASIC20.69■□□□□ 0.9
CCDC188H7C350 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC188H7C350 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.68■□□□□ 0.9
CCDC188H7C350 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms