Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 NBPF21P-201ENST00000425093 1451 ntBASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV10A0A0B4J240 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 AL049637.2-201ENST00000641778 930 ntBASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 PLK5-205ENST00000642079 1969 ntBASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 AC006128.1-201ENST00000624704 1661 ntBASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV10A0A0B4J240 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 FP700111.2-201ENST00000619190 1892 ntBASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 AL353807.1-201ENST00000427475 662 ntBASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 KRT16P5-201ENST00000455284 522 ntBASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 MIR4785-201ENST00000585005 73 ntBASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 KRT8P17-201ENST00000453110 1448 ntBASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV10A0A0B4J240 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms