Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
HCFC2Q9Y5Z7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
HCFC2Q9Y5Z7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
HCFC2Q9Y5Z7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
HCFC2Q9Y5Z7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
HCFC2Q9Y5Z7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.7■■■□□ 2.03
HCFC2Q9Y5Z7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.7■■■□□ 2.03
HCFC2Q9Y5Z7 GPX1-201ENST00000419349 1106 ntBASIC27.7■■■□□ 2.02
HCFC2Q9Y5Z7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.7■■■□□ 2.02
HCFC2Q9Y5Z7 ABHD17AP5-201ENST00000580133 923 ntBASIC27.7■■■□□ 2.02
HCFC2Q9Y5Z7 LINC00273-201ENST00000539813 1452 ntBASIC27.7■■■□□ 2.02
HCFC2Q9Y5Z7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.7■■■□□ 2.02
HCFC2Q9Y5Z7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
HCFC2Q9Y5Z7 AL161658.1-201ENST00000623641 1967 ntBASIC27.68■■■□□ 2.02
HCFC2Q9Y5Z7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.67■■■□□ 2.02
HCFC2Q9Y5Z7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
HCFC2Q9Y5Z7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
HCFC2Q9Y5Z7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
HCFC2Q9Y5Z7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.65■■■□□ 2.02
HCFC2Q9Y5Z7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
HCFC2Q9Y5Z7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.65■■■□□ 2.02
HCFC2Q9Y5Z7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.65■■■□□ 2.02
HCFC2Q9Y5Z7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
HCFC2Q9Y5Z7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
HCFC2Q9Y5Z7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.64■■■□□ 2.02
HCFC2Q9Y5Z7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
HCFC2Q9Y5Z7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
HCFC2Q9Y5Z7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.63■■■□□ 2.01
HCFC2Q9Y5Z7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
HCFC2Q9Y5Z7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC27.63■■■□□ 2.01
HCFC2Q9Y5Z7 RNF126P1-201ENST00000567452 1320 ntBASIC27.63■■■□□ 2.01
HCFC2Q9Y5Z7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
HCFC2Q9Y5Z7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
HCFC2Q9Y5Z7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
HCFC2Q9Y5Z7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HCFC2Q9Y5Z7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
HCFC2Q9Y5Z7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
HCFC2Q9Y5Z7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
HCFC2Q9Y5Z7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
HCFC2Q9Y5Z7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
HCFC2Q9Y5Z7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
HCFC2Q9Y5Z7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.58■■■□□ 2.01
HCFC2Q9Y5Z7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
HCFC2Q9Y5Z7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.57■■■□□ 2
HCFC2Q9Y5Z7 AC010864.1-201ENST00000609407 1511 ntBASIC27.57■■■□□ 2
HCFC2Q9Y5Z7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.56■■■□□ 2
HCFC2Q9Y5Z7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
HCFC2Q9Y5Z7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.56■■■□□ 2
HCFC2Q9Y5Z7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.56■■■□□ 2
HCFC2Q9Y5Z7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
HCFC2Q9Y5Z7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
HCFC2Q9Y5Z7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC27.55■■■□□ 2
HCFC2Q9Y5Z7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
HCFC2Q9Y5Z7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC27.54■■■□□ 2
HCFC2Q9Y5Z7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
HCFC2Q9Y5Z7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.53■■■□□ 2
HCFC2Q9Y5Z7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.52■■■□□ 2
HCFC2Q9Y5Z7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.51■■■□□ 2
HCFC2Q9Y5Z7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
HCFC2Q9Y5Z7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
HCFC2Q9Y5Z7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
HCFC2Q9Y5Z7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.51■■□□□ 1.99
HCFC2Q9Y5Z7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
HCFC2Q9Y5Z7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
HCFC2Q9Y5Z7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.48■■□□□ 1.99
HCFC2Q9Y5Z7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
HCFC2Q9Y5Z7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
HCFC2Q9Y5Z7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.47■■□□□ 1.99
HCFC2Q9Y5Z7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
HCFC2Q9Y5Z7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
HCFC2Q9Y5Z7 AC022413.1-201ENST00000624602 984 ntBASIC27.46■■□□□ 1.99
HCFC2Q9Y5Z7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
HCFC2Q9Y5Z7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.45■■□□□ 1.99
HCFC2Q9Y5Z7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.44■■□□□ 1.98
HCFC2Q9Y5Z7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
HCFC2Q9Y5Z7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
HCFC2Q9Y5Z7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.43■■□□□ 1.98
HCFC2Q9Y5Z7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.43■■□□□ 1.98
HCFC2Q9Y5Z7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
HCFC2Q9Y5Z7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
HCFC2Q9Y5Z7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HCFC2Q9Y5Z7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.41■■□□□ 1.98
HCFC2Q9Y5Z7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
HCFC2Q9Y5Z7 AC008813.1-201ENST00000536597 885 ntBASIC27.41■■□□□ 1.98
HCFC2Q9Y5Z7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
HCFC2Q9Y5Z7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
HCFC2Q9Y5Z7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
HCFC2Q9Y5Z7 NTF6A-201ENST00000591175 560 ntBASIC27.4■■□□□ 1.98
HCFC2Q9Y5Z7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
HCFC2Q9Y5Z7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
HCFC2Q9Y5Z7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HCFC2Q9Y5Z7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
HCFC2Q9Y5Z7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.39■■□□□ 1.98
HCFC2Q9Y5Z7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
HCFC2Q9Y5Z7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
HCFC2Q9Y5Z7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.38■■□□□ 1.97
HCFC2Q9Y5Z7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.37■■□□□ 1.97
HCFC2Q9Y5Z7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
HCFC2Q9Y5Z7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
HCFC2Q9Y5Z7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms