Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.47■■■□□ 2.63
PCDHAC2Q9Y5I4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PCDHAC2Q9Y5I4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PCDHAC2Q9Y5I4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.46■■■□□ 2.63
PCDHAC2Q9Y5I4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.46■■■□□ 2.63
PCDHAC2Q9Y5I4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
PCDHAC2Q9Y5I4 LINC00273-201ENST00000539813 1452 ntBASIC31.46■■■□□ 2.63
PCDHAC2Q9Y5I4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.45■■■□□ 2.63
PCDHAC2Q9Y5I4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PCDHAC2Q9Y5I4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.45■■■□□ 2.63
PCDHAC2Q9Y5I4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
PCDHAC2Q9Y5I4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
PCDHAC2Q9Y5I4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.45■■■□□ 2.62
PCDHAC2Q9Y5I4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
PCDHAC2Q9Y5I4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
PCDHAC2Q9Y5I4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC31.44■■■□□ 2.62
PCDHAC2Q9Y5I4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCDHAC2Q9Y5I4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
PCDHAC2Q9Y5I4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PCDHAC2Q9Y5I4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PCDHAC2Q9Y5I4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PCDHAC2Q9Y5I4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.38■■■□□ 2.61
PCDHAC2Q9Y5I4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PCDHAC2Q9Y5I4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHAC2Q9Y5I4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHAC2Q9Y5I4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PCDHAC2Q9Y5I4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PCDHAC2Q9Y5I4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHAC2Q9Y5I4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHAC2Q9Y5I4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PCDHAC2Q9Y5I4 RARRES2P2-201ENST00000394842 485 ntBASIC31.33■■■□□ 2.61
PCDHAC2Q9Y5I4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.33■■■□□ 2.61
PCDHAC2Q9Y5I4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.33■■■□□ 2.61
PCDHAC2Q9Y5I4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
PCDHAC2Q9Y5I4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.32■■■□□ 2.6
PCDHAC2Q9Y5I4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
PCDHAC2Q9Y5I4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.31■■■□□ 2.6
PCDHAC2Q9Y5I4 GPX1-201ENST00000419349 1106 ntBASIC31.31■■■□□ 2.6
PCDHAC2Q9Y5I4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PCDHAC2Q9Y5I4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
PCDHAC2Q9Y5I4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDHAC2Q9Y5I4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
PCDHAC2Q9Y5I4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDHAC2Q9Y5I4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PCDHAC2Q9Y5I4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
PCDHAC2Q9Y5I4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHAC2Q9Y5I4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PCDHAC2Q9Y5I4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
PCDHAC2Q9Y5I4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHAC2Q9Y5I4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
PCDHAC2Q9Y5I4 AC127502.1-201ENST00000399971 1502 ntBASIC31.24■■■□□ 2.59
PCDHAC2Q9Y5I4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.24■■■□□ 2.59
PCDHAC2Q9Y5I4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PCDHAC2Q9Y5I4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.23■■■□□ 2.59
PCDHAC2Q9Y5I4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
PCDHAC2Q9Y5I4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
PCDHAC2Q9Y5I4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
PCDHAC2Q9Y5I4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PCDHAC2Q9Y5I4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
PCDHAC2Q9Y5I4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.21■■■□□ 2.59
PCDHAC2Q9Y5I4 WHAMMP2-203ENST00000563942 1603 ntBASIC31.2■■■□□ 2.59
PCDHAC2Q9Y5I4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
PCDHAC2Q9Y5I4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
PCDHAC2Q9Y5I4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.2■■■□□ 2.59
PCDHAC2Q9Y5I4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
PCDHAC2Q9Y5I4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
PCDHAC2Q9Y5I4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
PCDHAC2Q9Y5I4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.18■■■□□ 2.58
PCDHAC2Q9Y5I4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHAC2Q9Y5I4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHAC2Q9Y5I4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.18■■■□□ 2.58
PCDHAC2Q9Y5I4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
PCDHAC2Q9Y5I4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PCDHAC2Q9Y5I4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
PCDHAC2Q9Y5I4 ABHD17AP5-201ENST00000580133 923 ntBASIC31.16■■■□□ 2.58
PCDHAC2Q9Y5I4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
PCDHAC2Q9Y5I4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
PCDHAC2Q9Y5I4 AC135983.2-203ENST00000454486 1613 ntBASIC31.14■■■□□ 2.58
PCDHAC2Q9Y5I4 RNF126P1-201ENST00000567452 1320 ntBASIC31.14■■■□□ 2.58
PCDHAC2Q9Y5I4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
PCDHAC2Q9Y5I4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.13■■■□□ 2.57
PCDHAC2Q9Y5I4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
PCDHAC2Q9Y5I4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.12■■■□□ 2.57
PCDHAC2Q9Y5I4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
PCDHAC2Q9Y5I4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PCDHAC2Q9Y5I4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PCDHAC2Q9Y5I4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PCDHAC2Q9Y5I4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
PCDHAC2Q9Y5I4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms