Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.57■■■□□ 2.32
PCDHA7Q9UN72 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
PCDHA7Q9UN72 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDHA7Q9UN72 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC29.55■■■□□ 2.32
PCDHA7Q9UN72 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.54■■■□□ 2.32
PCDHA7Q9UN72 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
PCDHA7Q9UN72 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC29.54■■■□□ 2.32
PCDHA7Q9UN72 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA7Q9UN72 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
PCDHA7Q9UN72 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.53■■■□□ 2.32
PCDHA7Q9UN72 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHA7Q9UN72 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHA7Q9UN72 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHA7Q9UN72 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDHA7Q9UN72 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
PCDHA7Q9UN72 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC29.51■■■□□ 2.31
PCDHA7Q9UN72 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
PCDHA7Q9UN72 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.51■■■□□ 2.31
PCDHA7Q9UN72 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDHA7Q9UN72 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PCDHA7Q9UN72 AC127502.1-201ENST00000399971 1502 ntBASIC29.5■■■□□ 2.31
PCDHA7Q9UN72 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA7Q9UN72 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA7Q9UN72 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA7Q9UN72 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA7Q9UN72 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
PCDHA7Q9UN72 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDHA7Q9UN72 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.48■■■□□ 2.31
PCDHA7Q9UN72 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
PCDHA7Q9UN72 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA7Q9UN72 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA7Q9UN72 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PCDHA7Q9UN72 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.47■■■□□ 2.31
PCDHA7Q9UN72 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.47■■■□□ 2.31
PCDHA7Q9UN72 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
PCDHA7Q9UN72 AP004833.2-201ENST00000532228 1454 ntBASIC29.46■■■□□ 2.31
PCDHA7Q9UN72 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.46■■■□□ 2.31
PCDHA7Q9UN72 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
PCDHA7Q9UN72 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC29.44■■■□□ 2.3
PCDHA7Q9UN72 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC29.44■■■□□ 2.3
PCDHA7Q9UN72 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC29.44■■■□□ 2.3
PCDHA7Q9UN72 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA7Q9UN72 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.43■■■□□ 2.3
PCDHA7Q9UN72 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA7Q9UN72 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC29.43■■■□□ 2.3
PCDHA7Q9UN72 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
PCDHA7Q9UN72 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
PCDHA7Q9UN72 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.42■■■□□ 2.3
PCDHA7Q9UN72 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.42■■■□□ 2.3
PCDHA7Q9UN72 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.42■■■□□ 2.3
PCDHA7Q9UN72 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.42■■■□□ 2.3
PCDHA7Q9UN72 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
PCDHA7Q9UN72 MIR762-201ENST00000390236 83 ntBASIC29.41■■■□□ 2.3
PCDHA7Q9UN72 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
PCDHA7Q9UN72 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCDHA7Q9UN72 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
PCDHA7Q9UN72 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
PCDHA7Q9UN72 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
PCDHA7Q9UN72 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PCDHA7Q9UN72 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.35■■■□□ 2.29
PCDHA7Q9UN72 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
PCDHA7Q9UN72 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.34■■■□□ 2.29
PCDHA7Q9UN72 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA7Q9UN72 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA7Q9UN72 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA7Q9UN72 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
PCDHA7Q9UN72 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA7Q9UN72 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA7Q9UN72 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
PCDHA7Q9UN72 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA7Q9UN72 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.33■■■□□ 2.29
PCDHA7Q9UN72 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA7Q9UN72 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
PCDHA7Q9UN72 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHA7Q9UN72 SUZ12P1-203ENST00000578195 985 ntBASIC29.32■■■□□ 2.28
PCDHA7Q9UN72 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
PCDHA7Q9UN72 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
PCDHA7Q9UN72 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHA7Q9UN72 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
PCDHA7Q9UN72 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
PCDHA7Q9UN72 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC29.31■■■□□ 2.28
PCDHA7Q9UN72 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
PCDHA7Q9UN72 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
PCDHA7Q9UN72 PROC-203ENST00000409048 1586 ntTSL 5 BASIC29.29■■■□□ 2.28
PCDHA7Q9UN72 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC29.28■■■□□ 2.28
PCDHA7Q9UN72 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHA7Q9UN72 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
PCDHA7Q9UN72 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
PCDHA7Q9UN72 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC29.26■■■□□ 2.28
PCDHA7Q9UN72 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA7Q9UN72 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.26■■■□□ 2.27
PCDHA7Q9UN72 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.26■■■□□ 2.27
PCDHA7Q9UN72 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
PCDHA7Q9UN72 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
PCDHA7Q9UN72 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.26■■■□□ 2.27
PCDHA7Q9UN72 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA7Q9UN72 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PCDHA7Q9UN72 AC100797.4-201ENST00000631653 1827 ntBASIC29.24■■■□□ 2.27
PCDHA7Q9UN72 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC29.24■■■□□ 2.27
PCDHA7Q9UN72 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms