Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.34■■□□□ 1.65
LRIT1Q9P2V4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
LRIT1Q9P2V4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
LRIT1Q9P2V4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.32■■□□□ 1.64
LRIT1Q9P2V4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
LRIT1Q9P2V4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRIT1Q9P2V4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
LRIT1Q9P2V4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.31■■□□□ 1.64
LRIT1Q9P2V4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRIT1Q9P2V4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.31■■□□□ 1.64
LRIT1Q9P2V4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.31■■□□□ 1.64
LRIT1Q9P2V4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.3■■□□□ 1.64
LRIT1Q9P2V4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRIT1Q9P2V4 LINC00273-201ENST00000539813 1452 ntBASIC25.3■■□□□ 1.64
LRIT1Q9P2V4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.3■■□□□ 1.64
LRIT1Q9P2V4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.3■■□□□ 1.64
LRIT1Q9P2V4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
LRIT1Q9P2V4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRIT1Q9P2V4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRIT1Q9P2V4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
LRIT1Q9P2V4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.28■■□□□ 1.64
LRIT1Q9P2V4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
LRIT1Q9P2V4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
LRIT1Q9P2V4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.26■■□□□ 1.63
LRIT1Q9P2V4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.26■■□□□ 1.63
LRIT1Q9P2V4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LRIT1Q9P2V4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
LRIT1Q9P2V4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRIT1Q9P2V4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
LRIT1Q9P2V4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
LRIT1Q9P2V4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRIT1Q9P2V4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRIT1Q9P2V4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRIT1Q9P2V4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LRIT1Q9P2V4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRIT1Q9P2V4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRIT1Q9P2V4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.21■■□□□ 1.63
LRIT1Q9P2V4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
LRIT1Q9P2V4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
LRIT1Q9P2V4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
LRIT1Q9P2V4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
LRIT1Q9P2V4 HSD17B1P1-201ENST00000590052 955 ntBASIC25.19■■□□□ 1.62
LRIT1Q9P2V4 AL135925.1-201ENST00000605920 1701 ntBASIC25.19■■□□□ 1.62
LRIT1Q9P2V4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
LRIT1Q9P2V4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LRIT1Q9P2V4 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.18■■□□□ 1.62
LRIT1Q9P2V4 AC127502.1-201ENST00000399971 1502 ntBASIC25.17■■□□□ 1.62
LRIT1Q9P2V4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRIT1Q9P2V4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRIT1Q9P2V4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.17■■□□□ 1.62
LRIT1Q9P2V4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.17■■□□□ 1.62
LRIT1Q9P2V4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.16■■□□□ 1.62
LRIT1Q9P2V4 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
LRIT1Q9P2V4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.14■■□□□ 1.62
LRIT1Q9P2V4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.14■■□□□ 1.61
LRIT1Q9P2V4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.61
LRIT1Q9P2V4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.13■■□□□ 1.61
LRIT1Q9P2V4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
LRIT1Q9P2V4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.12■■□□□ 1.61
LRIT1Q9P2V4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LRIT1Q9P2V4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
LRIT1Q9P2V4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
LRIT1Q9P2V4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LRIT1Q9P2V4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LRIT1Q9P2V4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.11■■□□□ 1.61
LRIT1Q9P2V4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
LRIT1Q9P2V4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LRIT1Q9P2V4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.1■■□□□ 1.61
LRIT1Q9P2V4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRIT1Q9P2V4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
LRIT1Q9P2V4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRIT1Q9P2V4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
LRIT1Q9P2V4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LRIT1Q9P2V4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRIT1Q9P2V4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRIT1Q9P2V4 AC135983.2-203ENST00000454486 1613 ntBASIC25.07■■□□□ 1.6
LRIT1Q9P2V4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LRIT1Q9P2V4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.06■■□□□ 1.6
LRIT1Q9P2V4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.06■■□□□ 1.6
LRIT1Q9P2V4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
LRIT1Q9P2V4 WHAMMP2-203ENST00000563942 1603 ntBASIC25.05■■□□□ 1.6
LRIT1Q9P2V4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
LRIT1Q9P2V4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
LRIT1Q9P2V4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
LRIT1Q9P2V4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.05■■□□□ 1.6
LRIT1Q9P2V4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LRIT1Q9P2V4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
LRIT1Q9P2V4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LRIT1Q9P2V4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.03■■□□□ 1.6
LRIT1Q9P2V4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
LRIT1Q9P2V4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms