Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.12□□□□□ -1.592e-6■■■■□ 20
BCCIPQ9P287 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.444e-6■■■■□ 19.9
BCCIPQ9P287 ANKLE2-207ENST00000539605 10890 ntTSL 1 (best)17.44■□□□□ 0.384e-6■■■■□ 19.9
BCCIPQ9P287 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.064e-6■■■■□ 19.9
BCCIPQ9P287 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.114e-6■■■■□ 19.9
BCCIPQ9P287 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.124e-6■■■■□ 19.9
BCCIPQ9P287 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.424e-6■■■■□ 19.9
BCCIPQ9P287 SIN3B-207ENST00000595900 563 ntTSL 411.37□□□□□ -0.595e-6■■■■□ 19.9
BCCIPQ9P287 ANKLE2-205ENST00000538591 886 ntTSL 39.33□□□□□ -0.924e-6■■■■□ 19.9
BCCIPQ9P287 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC9.29□□□□□ -0.924e-6■■■■□ 19.9
BCCIPQ9P287 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.24□□□□□ -1.094e-6■■■■□ 19.9
BCCIPQ9P287 ANKLE2-211ENST00000545623 1288 ntTSL 38.12□□□□□ -1.114e-6■■■■□ 19.9
BCCIPQ9P287 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.08□□□□□ -1.124e-6■■■■□ 19.9
BCCIPQ9P287 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC7.79□□□□□ -1.164e-6■■■■□ 19.9
BCCIPQ9P287 ATP11A-209ENST00000466946 431 ntTSL 57.48□□□□□ -1.214e-6■■■■□ 19.9
BCCIPQ9P287 ANKLE2-204ENST00000535036 741 ntTSL 56.87□□□□□ -1.314e-6■■■■□ 19.9
BCCIPQ9P287 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.55□□□□□ -1.364e-6■■■■□ 19.9
BCCIPQ9P287 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.97□□□□□ -1.454e-6■■■■□ 19.9
BCCIPQ9P287 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.94□□□□□ -1.784e-6■■■■□ 19.9
BCCIPQ9P287 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.19□□□□□ -1.94e-6■■■■□ 19.9
BCCIPQ9P287 PLCB1-220ENST00000630757 857 ntTSL 35.94□□□□□ -1.464e-7■■■■□ 19.6
BCCIPQ9P287 PLCB1-229ENST00000637204 100 ntTSL 52.22□□□□□ -2.054e-7■■■■□ 19.6
BCCIPQ9P287 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.684e-6■■■■□ 19.6
BCCIPQ9P287 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.634e-6■■■■□ 19.6
BCCIPQ9P287 AP3D1-207ENST00000589369 618 ntTSL 317.96■□□□□ 0.474e-6■■■■□ 19.6
BCCIPQ9P287 AP3D1-211ENST00000591650 1437 ntTSL 1 (best)17.47■□□□□ 0.394e-6■■■■□ 19.6
BCCIPQ9P287 AP3D1-203ENST00000585652 4433 ntTSL 214.63□□□□□ -0.074e-6■■■■□ 19.6
BCCIPQ9P287 AP3D1-206ENST00000589223 3357 ntTSL 213.11□□□□□ -0.314e-6■■■■□ 19.6
BCCIPQ9P287 AP3D1-205ENST00000586370 911 ntTSL 27.58□□□□□ -1.24e-6■■■■□ 19.6
BCCIPQ9P287 BLCAP-213ENST00000467603 439 ntTSL 316.41■□□□□ 0.226e-7■■■■□ 19.5
BCCIPQ9P287 CTAGE5-203ENST00000341502 4091 ntTSL 1 (best) BASIC11.65□□□□□ -0.544e-7■■■■□ 19.4
BCCIPQ9P287 RPTOR-208ENST00000574767 2461 ntTSL 217.21■□□□□ 0.357e-6■■■■□ 19.3
BCCIPQ9P287 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.347e-6■■■■□ 19.3
BCCIPQ9P287 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.97■□□□□ 0.317e-6■■■■□ 19.3
BCCIPQ9P287 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.33■□□□□ 0.27e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.82■□□□□ 0.127e-6■■■■□ 19.3
BCCIPQ9P287 NUTM2A-AS1-210ENST00000451940 662 ntTSL 515.52■□□□□ 0.087e-6■■■■□ 19.3
BCCIPQ9P287 RPRD1B-203ENST00000462548 2436 ntTSL 515.28■□□□□ 0.047e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-209ENST00000445654 522 ntTSL 315.07■□□□□ 07e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.72□□□□□ -0.057e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC14.03□□□□□ -0.167e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.97□□□□□ -0.177e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC13.86□□□□□ -0.197e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC13.86□□□□□ -0.197e-6■■■■□ 19.3
BCCIPQ9P287 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC13.74□□□□□ -0.217e-6■■■■□ 19.3
BCCIPQ9P287 RPTOR-211ENST00000577161 3633 ntTSL 212.42□□□□□ -0.427e-6■■■■□ 19.3
BCCIPQ9P287 RNF213-207ENST00000559070 4644 ntTSL 1 (best)12.35□□□□□ -0.437e-6■■■■□ 19.3
BCCIPQ9P287 RPRD1B-201ENST00000373433 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.447e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-205ENST00000412252 1376 ntTSL 512.2□□□□□ -0.467e-6■■■■□ 19.3
BCCIPQ9P287 RPRD1B-202ENST00000449186 591 ntTSL 411.24□□□□□ -0.617e-6■■■■□ 19.3
BCCIPQ9P287 SHANK2-208ENST00000426687 460 ntTSL 59.56□□□□□ -0.887e-6■■■■□ 19.3
BCCIPQ9P287 RPRD1B-207ENST00000614670 659 ntTSL 38.78□□□□□ -17e-6■■■■□ 19.3
BCCIPQ9P287 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.117e-6■■■■□ 19.3
BCCIPQ9P287 RPRD1B-208ENST00000618318 567 ntTSL 48.07□□□□□ -1.127e-6■■■■□ 19.3
BCCIPQ9P287 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC7.75□□□□□ -1.172e-6■■■■□ 19.3
BCCIPQ9P287 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.337e-6■■■■□ 19.3
BCCIPQ9P287 MAD1L1-212ENST00000450235 850 ntTSL 317.97■□□□□ 0.474e-8■■■□□ 19.2
BCCIPQ9P287 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.464e-8■■■□□ 19.2
BCCIPQ9P287 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.45■□□□□ 0.224e-8■■■□□ 19.2
BCCIPQ9P287 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.134e-8■■■□□ 19.2
BCCIPQ9P287 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.044e-8■■■□□ 19.2
BCCIPQ9P287 MAD1L1-219ENST00000481633 548 ntTSL 214.67□□□□□ -0.064e-8■■■□□ 19.2
BCCIPQ9P287 CWF19L1-206ENST00000478047 2694 ntTSL 213.09□□□□□ -0.315e-25■■■□□ 19.2
BCCIPQ9P287 CWF19L1-204ENST00000468709 2402 ntTSL 210.07□□□□□ -0.85e-25■■■□□ 19.2
BCCIPQ9P287 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.965e-25■■■□□ 19.2
BCCIPQ9P287 CWF19L1-207ENST00000482452 1606 ntTSL 57.97□□□□□ -1.135e-25■■■□□ 19.2
BCCIPQ9P287 ENC1-203ENST00000509127 584 ntTSL 320.96■□□□□ 0.956e-7■■■□□ 19.2
BCCIPQ9P287 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.816e-7■■■□□ 19.2
BCCIPQ9P287 ENC1-202ENST00000508331 1405 ntTSL 419.95■□□□□ 0.786e-7■■■□□ 19.2
BCCIPQ9P287 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.47■□□□□ 0.716e-7■■■□□ 19.2
BCCIPQ9P287 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.686e-7■■■□□ 19.2
BCCIPQ9P287 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.256e-7■■■□□ 19.2
BCCIPQ9P287 SHANK2-220ENST00000608988 1879 ntTSL 524.37■■□□□ 1.492e-6■■■□□ 19.1
BCCIPQ9P287 SHANK2-212ENST00000458632 635 ntTSL 312.63□□□□□ -0.392e-6■■■□□ 19.1
BCCIPQ9P287 SHANK2-221ENST00000618363 434 ntTSL 312.27□□□□□ -0.452e-6■■■□□ 19.1
BCCIPQ9P287 SNORA12-201ENST00000391162 147 ntBASIC2.23□□□□□ -2.054e-81■■■□□ 19.1
BCCIPQ9P287 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.16■■□□□ 1.462e-6■■■□□ 19.1
BCCIPQ9P287 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.54■□□□□ 0.082e-6■■■□□ 19.1
BCCIPQ9P287 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.43■□□□□ 0.062e-6■■■□□ 19.1
BCCIPQ9P287 PCMTD2-203ENST00000308824 3843 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.552e-6■■■□□ 19.1
BCCIPQ9P287 PCMTD2-209ENST00000609818 551 ntTSL 47.43□□□□□ -1.222e-6■■■□□ 19.1
BCCIPQ9P287 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.64■■□□□ 1.057e-7■■■□□ 19
BCCIPQ9P287 PTTG1IP-206ENST00000480234 398 ntTSL 321.25■□□□□ 0.997e-7■■■□□ 19
BCCIPQ9P287 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.767e-7■■■□□ 19
BCCIPQ9P287 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.48■□□□□ 0.717e-7■■■□□ 19
BCCIPQ9P287 PTTG1IP-207ENST00000494690 612 ntTSL 512.61□□□□□ -0.397e-7■■■□□ 19
BCCIPQ9P287 CPNE1-214ENST00000435747 400 ntTSL 311.3□□□□□ -0.64e-7■■■□□ 18.8
BCCIPQ9P287 EIF4G3-206ENST00000411888 1122 ntTSL 527.76■■■□□ 2.031e-6■■■□□ 18.6
BCCIPQ9P287 EIF4G3-208ENST00000438975 1270 ntTSL 520.63■□□□□ 0.891e-6■■■□□ 18.6
BCCIPQ9P287 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.44■□□□□ 0.861e-6■■■□□ 18.6
BCCIPQ9P287 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.721e-6■■■□□ 18.6
BCCIPQ9P287 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.561e-6■■■□□ 18.6
BCCIPQ9P287 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.211e-6■■■□□ 18.6
BCCIPQ9P287 PTTG1IP-205ENST00000474737 580 ntTSL 316.62■□□□□ 0.259e-7■■■□□ 18.3
BCCIPQ9P287 CD164-208ENST00000506649 778 ntTSL 322.4■■□□□ 1.183e-10■■■□□ 18
BCCIPQ9P287 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.259e-8■■■□□ 17.9
BCCIPQ9P287 CD164-209ENST00000512212 590 ntTSL 214.41□□□□□ -0.12e-10■■■□□ 17.8
BCCIPQ9P287 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.41□□□□□ -0.12e-10■■■□□ 17.8
BCCIPQ9P287 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC12.72□□□□□ -0.372e-10■■■□□ 17.8
BCCIPQ9P287 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.632e-10■■■□□ 17.8
Retrieved 100 of 1,347 protein–RNA pairs in 19.8 ms