Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RNF216Q9NWF9 AC120057.4-201ENST00000624722 1615 ntBASIC28.93■■■□□ 2.22
RNF216Q9NWF9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RNF216Q9NWF9 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RNF216Q9NWF9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
RNF216Q9NWF9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
RNF216Q9NWF9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RNF216Q9NWF9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.91■■■□□ 2.22
RNF216Q9NWF9 MIR3648-2-201ENST00000581792 180 ntBASIC28.91■■■□□ 2.22
RNF216Q9NWF9 MIR3648-1-201ENST00000615959 180 ntBASIC28.91■■■□□ 2.22
RNF216Q9NWF9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
RNF216Q9NWF9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
RNF216Q9NWF9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
RNF216Q9NWF9 DUX4L11-201ENST00000611504 1267 ntBASIC28.89■■■□□ 2.22
RNF216Q9NWF9 DUX4L12-201ENST00000614593 1267 ntBASIC28.89■■■□□ 2.22
RNF216Q9NWF9 DUX4L14-201ENST00000621227 1267 ntBASIC28.89■■■□□ 2.22
RNF216Q9NWF9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.89■■■□□ 2.22
RNF216Q9NWF9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
RNF216Q9NWF9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.88■■■□□ 2.21
RNF216Q9NWF9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.88■■■□□ 2.21
RNF216Q9NWF9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RNF216Q9NWF9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
RNF216Q9NWF9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
RNF216Q9NWF9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RNF216Q9NWF9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RNF216Q9NWF9 AC016575.1-201ENST00000607026 382 ntBASIC28.84■■■□□ 2.21
RNF216Q9NWF9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RNF216Q9NWF9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.84■■■□□ 2.21
RNF216Q9NWF9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RNF216Q9NWF9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RNF216Q9NWF9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC28.83■■■□□ 2.21
RNF216Q9NWF9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.83■■■□□ 2.21
RNF216Q9NWF9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.82■■■□□ 2.2
RNF216Q9NWF9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.82■■■□□ 2.2
RNF216Q9NWF9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RNF216Q9NWF9 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.82■■■□□ 2.2
RNF216Q9NWF9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.82■■■□□ 2.2
RNF216Q9NWF9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RNF216Q9NWF9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.81■■■□□ 2.2
RNF216Q9NWF9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
RNF216Q9NWF9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
RNF216Q9NWF9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RNF216Q9NWF9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.79■■■□□ 2.2
RNF216Q9NWF9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
RNF216Q9NWF9 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RNF216Q9NWF9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RNF216Q9NWF9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
RNF216Q9NWF9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
RNF216Q9NWF9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.76■■■□□ 2.19
RNF216Q9NWF9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
RNF216Q9NWF9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RNF216Q9NWF9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RNF216Q9NWF9 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
RNF216Q9NWF9 CR559946.2-201ENST00000623684 991 ntBASIC28.74■■■□□ 2.19
RNF216Q9NWF9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.74■■■□□ 2.19
RNF216Q9NWF9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RNF216Q9NWF9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RNF216Q9NWF9 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.73■■■□□ 2.19
RNF216Q9NWF9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RNF216Q9NWF9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
RNF216Q9NWF9 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
RNF216Q9NWF9 AC098799.1-201ENST00000504752 800 ntBASIC28.71■■■□□ 2.19
RNF216Q9NWF9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.71■■■□□ 2.19
RNF216Q9NWF9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
RNF216Q9NWF9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.7■■■□□ 2.18
RNF216Q9NWF9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
RNF216Q9NWF9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.7■■■□□ 2.18
RNF216Q9NWF9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF216Q9NWF9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.69■■■□□ 2.18
RNF216Q9NWF9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF216Q9NWF9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
RNF216Q9NWF9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.68■■■□□ 2.18
RNF216Q9NWF9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF216Q9NWF9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L13-201ENST00000554103 1267 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L15-201ENST00000611059 1267 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L23-201ENST00000615195 1269 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L24-201ENST00000617576 1269 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L22-201ENST00000618238 1269 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L20-201ENST00000619712 1269 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L21-201ENST00000622058 1269 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L10-201ENST00000622460 1267 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 DUX4L25-201ENST00000624915 1269 ntBASIC28.67■■■□□ 2.18
RNF216Q9NWF9 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC28.67■■■□□ 2.18
RNF216Q9NWF9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
RNF216Q9NWF9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF216Q9NWF9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RNF216Q9NWF9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
RNF216Q9NWF9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.66■■■□□ 2.18
RNF216Q9NWF9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RNF216Q9NWF9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RNF216Q9NWF9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
RNF216Q9NWF9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.64■■■□□ 2.18
RNF216Q9NWF9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
RNF216Q9NWF9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
RNF216Q9NWF9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF216Q9NWF9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.63■■■□□ 2.17
RNF216Q9NWF9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF216Q9NWF9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF216Q9NWF9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.62■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms