Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMCO4Q9NRQ5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMCO4Q9NRQ5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMCO4Q9NRQ5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.57■□□□□ 0.88
SMCO4Q9NRQ5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMCO4Q9NRQ5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SMCO4Q9NRQ5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMCO4Q9NRQ5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMCO4Q9NRQ5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMCO4Q9NRQ5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SMCO4Q9NRQ5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.55■□□□□ 0.88
SMCO4Q9NRQ5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SMCO4Q9NRQ5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMCO4Q9NRQ5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMCO4Q9NRQ5 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMCO4Q9NRQ5 AC093323.1-202ENST00000635031 2045 ntBASIC20.54■□□□□ 0.88
SMCO4Q9NRQ5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMCO4Q9NRQ5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.53■□□□□ 0.88
SMCO4Q9NRQ5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.53■□□□□ 0.88
SMCO4Q9NRQ5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMCO4Q9NRQ5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.52■□□□□ 0.87
SMCO4Q9NRQ5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.51■□□□□ 0.87
SMCO4Q9NRQ5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMCO4Q9NRQ5 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMCO4Q9NRQ5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMCO4Q9NRQ5 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMCO4Q9NRQ5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMCO4Q9NRQ5 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMCO4Q9NRQ5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMCO4Q9NRQ5 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMCO4Q9NRQ5 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMCO4Q9NRQ5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.49■□□□□ 0.87
SMCO4Q9NRQ5 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMCO4Q9NRQ5 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMCO4Q9NRQ5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMCO4Q9NRQ5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMCO4Q9NRQ5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SMCO4Q9NRQ5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMCO4Q9NRQ5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20.47■□□□□ 0.87
SMCO4Q9NRQ5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
SMCO4Q9NRQ5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMCO4Q9NRQ5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMCO4Q9NRQ5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SMCO4Q9NRQ5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMCO4Q9NRQ5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMCO4Q9NRQ5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMCO4Q9NRQ5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.45■□□□□ 0.86
SMCO4Q9NRQ5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SMCO4Q9NRQ5 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMCO4Q9NRQ5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMCO4Q9NRQ5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMCO4Q9NRQ5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.44■□□□□ 0.86
SMCO4Q9NRQ5 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.44■□□□□ 0.86
SMCO4Q9NRQ5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.43■□□□□ 0.86
SMCO4Q9NRQ5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMCO4Q9NRQ5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.41■□□□□ 0.86
SMCO4Q9NRQ5 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMCO4Q9NRQ5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.41■□□□□ 0.86
SMCO4Q9NRQ5 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMCO4Q9NRQ5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.41■□□□□ 0.86
SMCO4Q9NRQ5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SMCO4Q9NRQ5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMCO4Q9NRQ5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
SMCO4Q9NRQ5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.39■□□□□ 0.85
SMCO4Q9NRQ5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SMCO4Q9NRQ5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.38■□□□□ 0.85
SMCO4Q9NRQ5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMCO4Q9NRQ5 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMCO4Q9NRQ5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMCO4Q9NRQ5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMCO4Q9NRQ5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SMCO4Q9NRQ5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SMCO4Q9NRQ5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMCO4Q9NRQ5 AC020928.2-201ENST00000588717 2197 ntBASIC20.36■□□□□ 0.85
SMCO4Q9NRQ5 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SMCO4Q9NRQ5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SMCO4Q9NRQ5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMCO4Q9NRQ5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMCO4Q9NRQ5 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SMCO4Q9NRQ5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.34■□□□□ 0.85
SMCO4Q9NRQ5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMCO4Q9NRQ5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMCO4Q9NRQ5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMCO4Q9NRQ5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SMCO4Q9NRQ5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SMCO4Q9NRQ5 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMCO4Q9NRQ5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMCO4Q9NRQ5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
SMCO4Q9NRQ5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SMCO4Q9NRQ5 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMCO4Q9NRQ5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMCO4Q9NRQ5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.33■□□□□ 0.84
SMCO4Q9NRQ5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMCO4Q9NRQ5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
SMCO4Q9NRQ5 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMCO4Q9NRQ5 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMCO4Q9NRQ5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMCO4Q9NRQ5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.32■□□□□ 0.84
SMCO4Q9NRQ5 AL139393.2-201ENST00000608721 2025 ntBASIC20.31■□□□□ 0.84
SMCO4Q9NRQ5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms