Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CHD8Q9HCK8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC25.15■■□□□ 1.62
CHD8Q9HCK8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CHD8Q9HCK8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CHD8Q9HCK8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.14■■□□□ 1.62
CHD8Q9HCK8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.13■■□□□ 1.61
CHD8Q9HCK8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.13■■□□□ 1.61
CHD8Q9HCK8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CHD8Q9HCK8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CHD8Q9HCK8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.11■■□□□ 1.61
CHD8Q9HCK8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CHD8Q9HCK8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CHD8Q9HCK8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CHD8Q9HCK8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CHD8Q9HCK8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
CHD8Q9HCK8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CHD8Q9HCK8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.07■■□□□ 1.6
CHD8Q9HCK8 HES4-204ENST00000484667 667 ntTSL 3 BASIC25.07■■□□□ 1.6
CHD8Q9HCK8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CHD8Q9HCK8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
CHD8Q9HCK8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD8Q9HCK8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CHD8Q9HCK8 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC25.05■■□□□ 1.6
CHD8Q9HCK8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CHD8Q9HCK8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CHD8Q9HCK8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC25.03■■□□□ 1.6
CHD8Q9HCK8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.03■■□□□ 1.6
CHD8Q9HCK8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.03■■□□□ 1.6
CHD8Q9HCK8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.03■■□□□ 1.6
CHD8Q9HCK8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHD8Q9HCK8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CHD8Q9HCK8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CHD8Q9HCK8 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CHD8Q9HCK8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
CHD8Q9HCK8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.01■■□□□ 1.6
CHD8Q9HCK8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHD8Q9HCK8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHD8Q9HCK8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD8Q9HCK8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD8Q9HCK8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD8Q9HCK8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC25■■□□□ 1.59
CHD8Q9HCK8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25■■□□□ 1.59
CHD8Q9HCK8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD8Q9HCK8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.99■■□□□ 1.59
CHD8Q9HCK8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.99■■□□□ 1.59
CHD8Q9HCK8 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.99■■□□□ 1.59
CHD8Q9HCK8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.97■■□□□ 1.59
CHD8Q9HCK8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHD8Q9HCK8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHD8Q9HCK8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.96■■□□□ 1.59
CHD8Q9HCK8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
CHD8Q9HCK8 AC060814.1-201ENST00000554326 538 ntBASIC24.95■■□□□ 1.58
CHD8Q9HCK8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.95■■□□□ 1.58
CHD8Q9HCK8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHD8Q9HCK8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.93■■□□□ 1.58
CHD8Q9HCK8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHD8Q9HCK8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.92■■□□□ 1.58
CHD8Q9HCK8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHD8Q9HCK8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHD8Q9HCK8 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.91■■□□□ 1.58
CHD8Q9HCK8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.9■■□□□ 1.58
CHD8Q9HCK8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CHD8Q9HCK8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.9■■□□□ 1.58
CHD8Q9HCK8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
CHD8Q9HCK8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD8Q9HCK8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
CHD8Q9HCK8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHD8Q9HCK8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD8Q9HCK8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD8Q9HCK8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD8Q9HCK8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD8Q9HCK8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD8Q9HCK8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CHD8Q9HCK8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.85■■□□□ 1.57
CHD8Q9HCK8 AC092296.2-201ENST00000589470 999 ntBASIC24.85■■□□□ 1.57
CHD8Q9HCK8 AC009299.2-201ENST00000482477 511 ntBASIC24.85■■□□□ 1.57
CHD8Q9HCK8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.85■■□□□ 1.57
CHD8Q9HCK8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD8Q9HCK8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD8Q9HCK8 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CHD8Q9HCK8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.83■■□□□ 1.57
CHD8Q9HCK8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.83■■□□□ 1.57
CHD8Q9HCK8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.83■■□□□ 1.56
CHD8Q9HCK8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
CHD8Q9HCK8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CHD8Q9HCK8 THA1P-201ENST00000590384 1145 ntBASIC24.82■■□□□ 1.56
CHD8Q9HCK8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.82■■□□□ 1.56
CHD8Q9HCK8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHD8Q9HCK8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CHD8Q9HCK8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.81■■□□□ 1.56
CHD8Q9HCK8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.8■■□□□ 1.56
CHD8Q9HCK8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD8Q9HCK8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.8■■□□□ 1.56
CHD8Q9HCK8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHD8Q9HCK8 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHD8Q9HCK8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD8Q9HCK8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD8Q9HCK8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CHD8Q9HCK8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHD8Q9HCK8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms