Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
PRDM13Q9H4Q3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PRDM13Q9H4Q3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.28■■□□□ 1
PRDM13Q9H4Q3 MIR3648-2-201ENST00000581792 180 ntBASIC21.28■■□□□ 1
PRDM13Q9H4Q3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRDM13Q9H4Q3 MIR3648-1-201ENST00000615959 180 ntBASIC21.28■■□□□ 1
PRDM13Q9H4Q3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRDM13Q9H4Q3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.27■■□□□ 1
PRDM13Q9H4Q3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.27■■□□□ 1
PRDM13Q9H4Q3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.27■■□□□ 1
PRDM13Q9H4Q3 DUX4L11-201ENST00000611504 1267 ntBASIC21.27■■□□□ 1
PRDM13Q9H4Q3 DUX4L12-201ENST00000614593 1267 ntBASIC21.27■■□□□ 1
PRDM13Q9H4Q3 DUX4L14-201ENST00000621227 1267 ntBASIC21.27■■□□□ 1
PRDM13Q9H4Q3 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM13Q9H4Q3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM13Q9H4Q3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM13Q9H4Q3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM13Q9H4Q3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM13Q9H4Q3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.25■□□□□ 0.99
PRDM13Q9H4Q3 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM13Q9H4Q3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM13Q9H4Q3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM13Q9H4Q3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.24■□□□□ 0.99
PRDM13Q9H4Q3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM13Q9H4Q3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.23■□□□□ 0.99
PRDM13Q9H4Q3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.23■□□□□ 0.99
PRDM13Q9H4Q3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM13Q9H4Q3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM13Q9H4Q3 ABCB10P1-201ENST00000614297 2181 ntBASIC21.23■□□□□ 0.99
PRDM13Q9H4Q3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM13Q9H4Q3 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PRDM13Q9H4Q3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM13Q9H4Q3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM13Q9H4Q3 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM13Q9H4Q3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM13Q9H4Q3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 AC016575.1-201ENST00000607026 382 ntBASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM13Q9H4Q3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
PRDM13Q9H4Q3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRDM13Q9H4Q3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PRDM13Q9H4Q3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM13Q9H4Q3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRDM13Q9H4Q3 CR559946.2-201ENST00000623684 991 ntBASIC21.19■□□□□ 0.98
PRDM13Q9H4Q3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM13Q9H4Q3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.18■□□□□ 0.98
PRDM13Q9H4Q3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM13Q9H4Q3 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRDM13Q9H4Q3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.18■□□□□ 0.98
PRDM13Q9H4Q3 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM13Q9H4Q3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.17■□□□□ 0.98
PRDM13Q9H4Q3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.17■□□□□ 0.98
PRDM13Q9H4Q3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM13Q9H4Q3 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRDM13Q9H4Q3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM13Q9H4Q3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM13Q9H4Q3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM13Q9H4Q3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRDM13Q9H4Q3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PRDM13Q9H4Q3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRDM13Q9H4Q3 DUX4L13-201ENST00000554103 1267 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L15-201ENST00000611059 1267 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L23-201ENST00000615195 1269 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L24-201ENST00000617576 1269 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L22-201ENST00000618238 1269 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L20-201ENST00000619712 1269 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L21-201ENST00000622058 1269 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L10-201ENST00000622460 1267 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 DUX4L25-201ENST00000624915 1269 ntBASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PRDM13Q9H4Q3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PRDM13Q9H4Q3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PRDM13Q9H4Q3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.12■□□□□ 0.97
PRDM13Q9H4Q3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRDM13Q9H4Q3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM13Q9H4Q3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM13Q9H4Q3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.11■□□□□ 0.97
PRDM13Q9H4Q3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRDM13Q9H4Q3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.1■□□□□ 0.97
PRDM13Q9H4Q3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PRDM13Q9H4Q3 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM13Q9H4Q3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PRDM13Q9H4Q3 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM13Q9H4Q3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
PRDM13Q9H4Q3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.09■□□□□ 0.97
PRDM13Q9H4Q3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM13Q9H4Q3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM13Q9H4Q3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PRDM13Q9H4Q3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRDM13Q9H4Q3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms