Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 DUX4L28-201ENST00000623687 678 ntBASIC32.77■■■□□ 2.84
CHMP4BQ9H444 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
CHMP4BQ9H444 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
CHMP4BQ9H444 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHMP4BQ9H444 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHMP4BQ9H444 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.75■■■□□ 2.83
CHMP4BQ9H444 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHMP4BQ9H444 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
CHMP4BQ9H444 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
CHMP4BQ9H444 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.74■■■□□ 2.83
CHMP4BQ9H444 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
CHMP4BQ9H444 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
CHMP4BQ9H444 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHMP4BQ9H444 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
CHMP4BQ9H444 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CHMP4BQ9H444 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.71■■■□□ 2.83
CHMP4BQ9H444 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
CHMP4BQ9H444 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC32.7■■■□□ 2.83
CHMP4BQ9H444 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
CHMP4BQ9H444 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
CHMP4BQ9H444 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.69■■■□□ 2.82
CHMP4BQ9H444 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
CHMP4BQ9H444 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
CHMP4BQ9H444 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.67■■■□□ 2.82
CHMP4BQ9H444 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.67■■■□□ 2.82
CHMP4BQ9H444 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
CHMP4BQ9H444 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.66■■■□□ 2.82
CHMP4BQ9H444 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
CHMP4BQ9H444 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
CHMP4BQ9H444 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.65■■■□□ 2.82
CHMP4BQ9H444 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.63■■■□□ 2.81
CHMP4BQ9H444 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
CHMP4BQ9H444 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
CHMP4BQ9H444 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
CHMP4BQ9H444 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC32.59■■■□□ 2.81
CHMP4BQ9H444 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.59■■■□□ 2.81
CHMP4BQ9H444 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHMP4BQ9H444 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
CHMP4BQ9H444 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.59■■■□□ 2.81
CHMP4BQ9H444 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.58■■■□□ 2.81
CHMP4BQ9H444 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CHMP4BQ9H444 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
CHMP4BQ9H444 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.58■■■□□ 2.81
CHMP4BQ9H444 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.57■■■□□ 2.81
CHMP4BQ9H444 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.57■■■□□ 2.8
CHMP4BQ9H444 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.56■■■□□ 2.8
CHMP4BQ9H444 MIR6090-201ENST00000622481 60 ntBASIC32.56■■■□□ 2.8
CHMP4BQ9H444 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
CHMP4BQ9H444 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CHMP4BQ9H444 AC087741.3-201ENST00000624270 1347 ntBASIC32.55■■■□□ 2.8
CHMP4BQ9H444 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CHMP4BQ9H444 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.55■■■□□ 2.8
CHMP4BQ9H444 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
CHMP4BQ9H444 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
CHMP4BQ9H444 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
CHMP4BQ9H444 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.54■■■□□ 2.8
CHMP4BQ9H444 AC142086.6-201ENST00000621154 1765 ntBASIC32.54■■■□□ 2.8
CHMP4BQ9H444 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.53■■■□□ 2.8
CHMP4BQ9H444 AL162393.1-201ENST00000437852 946 ntBASIC32.53■■■□□ 2.8
CHMP4BQ9H444 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.52■■■□□ 2.8
CHMP4BQ9H444 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
CHMP4BQ9H444 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
CHMP4BQ9H444 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
CHMP4BQ9H444 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.79
CHMP4BQ9H444 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.5■■■□□ 2.79
CHMP4BQ9H444 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
CHMP4BQ9H444 AC044849.2-201ENST00000606596 710 ntBASIC32.5■■■□□ 2.79
CHMP4BQ9H444 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC32.5■■■□□ 2.79
CHMP4BQ9H444 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
CHMP4BQ9H444 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CHMP4BQ9H444 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
CHMP4BQ9H444 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC32.49■■■□□ 2.79
CHMP4BQ9H444 DRD5P2-201ENST00000421395 2012 ntBASIC32.48■■■□□ 2.79
CHMP4BQ9H444 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.47■■■□□ 2.79
CHMP4BQ9H444 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
CHMP4BQ9H444 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
CHMP4BQ9H444 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CHMP4BQ9H444 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CHMP4BQ9H444 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32.45■■■□□ 2.79
CHMP4BQ9H444 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.45■■■□□ 2.79
CHMP4BQ9H444 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.45■■■□□ 2.79
CHMP4BQ9H444 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CHMP4BQ9H444 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.45■■■□□ 2.78
CHMP4BQ9H444 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.44■■■□□ 2.78
CHMP4BQ9H444 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CHMP4BQ9H444 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CHMP4BQ9H444 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
CHMP4BQ9H444 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
CHMP4BQ9H444 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CHMP4BQ9H444 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
CHMP4BQ9H444 CIB2-204ENST00000557846 934 ntTSL 3 BASIC32.42■■■□□ 2.78
CHMP4BQ9H444 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.42■■■□□ 2.78
CHMP4BQ9H444 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.41■■■□□ 2.78
CHMP4BQ9H444 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms