Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SIGMAR1Q99720 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIGMAR1Q99720 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SIGMAR1Q99720 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIGMAR1Q99720 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIGMAR1Q99720 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SIGMAR1Q99720 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.49■□□□□ 0.39
SIGMAR1Q99720 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SIGMAR1Q99720 CLDN5-201ENST00000403084 2357 ntBASIC17.48■□□□□ 0.39
SIGMAR1Q99720 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIGMAR1Q99720 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIGMAR1Q99720 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SIGMAR1Q99720 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC17.48■□□□□ 0.39
SIGMAR1Q99720 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIGMAR1Q99720 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIGMAR1Q99720 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIGMAR1Q99720 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIGMAR1Q99720 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SIGMAR1Q99720 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC17.47■□□□□ 0.39
SIGMAR1Q99720 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIGMAR1Q99720 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIGMAR1Q99720 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SIGMAR1Q99720 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.46■□□□□ 0.39
SIGMAR1Q99720 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SIGMAR1Q99720 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.45■□□□□ 0.38
SIGMAR1Q99720 AL449106.1-201ENST00000608517 1980 ntBASIC17.45■□□□□ 0.38
SIGMAR1Q99720 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.45■□□□□ 0.38
SIGMAR1Q99720 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SIGMAR1Q99720 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.44■□□□□ 0.38
SIGMAR1Q99720 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIGMAR1Q99720 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIGMAR1Q99720 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIGMAR1Q99720 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIGMAR1Q99720 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIGMAR1Q99720 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIGMAR1Q99720 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SIGMAR1Q99720 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.42■□□□□ 0.38
SIGMAR1Q99720 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIGMAR1Q99720 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.42■□□□□ 0.38
SIGMAR1Q99720 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIGMAR1Q99720 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIGMAR1Q99720 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIGMAR1Q99720 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SIGMAR1Q99720 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIGMAR1Q99720 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.4■□□□□ 0.38
SIGMAR1Q99720 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SIGMAR1Q99720 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.4■□□□□ 0.38
SIGMAR1Q99720 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIGMAR1Q99720 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SIGMAR1Q99720 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.4■□□□□ 0.38
SIGMAR1Q99720 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SIGMAR1Q99720 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIGMAR1Q99720 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SIGMAR1Q99720 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SIGMAR1Q99720 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SIGMAR1Q99720 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SIGMAR1Q99720 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SIGMAR1Q99720 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SIGMAR1Q99720 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SIGMAR1Q99720 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SIGMAR1Q99720 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SIGMAR1Q99720 AC133561.1-201ENST00000568600 2415 ntBASIC17.37■□□□□ 0.37
SIGMAR1Q99720 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SIGMAR1Q99720 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.35■□□□□ 0.37
SIGMAR1Q99720 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.35■□□□□ 0.37
SIGMAR1Q99720 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SIGMAR1Q99720 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIGMAR1Q99720 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SIGMAR1Q99720 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
SIGMAR1Q99720 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.34■□□□□ 0.37
SIGMAR1Q99720 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIGMAR1Q99720 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIGMAR1Q99720 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIGMAR1Q99720 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.34■□□□□ 0.37
SIGMAR1Q99720 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SIGMAR1Q99720 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SIGMAR1Q99720 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIGMAR1Q99720 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIGMAR1Q99720 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SIGMAR1Q99720 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIGMAR1Q99720 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SIGMAR1Q99720 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SIGMAR1Q99720 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIGMAR1Q99720 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIGMAR1Q99720 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SIGMAR1Q99720 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.32■□□□□ 0.36
SIGMAR1Q99720 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIGMAR1Q99720 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SIGMAR1Q99720 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SIGMAR1Q99720 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SIGMAR1Q99720 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIGMAR1Q99720 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SIGMAR1Q99720 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms