Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
NAF1Q96HR8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NAF1Q96HR8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.9■■□□□ 1.74
NAF1Q96HR8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
NAF1Q96HR8 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
NAF1Q96HR8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NAF1Q96HR8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NAF1Q96HR8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.87■■□□□ 1.73
NAF1Q96HR8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NAF1Q96HR8 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NAF1Q96HR8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
NAF1Q96HR8 MIR4449-201ENST00000578365 66 ntBASIC25.84■■□□□ 1.73
NAF1Q96HR8 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.84■■□□□ 1.73
NAF1Q96HR8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.83■■□□□ 1.73
NAF1Q96HR8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
NAF1Q96HR8 WASH5P-204ENST00000632292 975 ntBASIC25.82■■□□□ 1.72
NAF1Q96HR8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NAF1Q96HR8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NAF1Q96HR8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NAF1Q96HR8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NAF1Q96HR8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.8■■□□□ 1.72
NAF1Q96HR8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NAF1Q96HR8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.79■■□□□ 1.72
NAF1Q96HR8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NAF1Q96HR8 AC142086.6-201ENST00000621154 1765 ntBASIC25.79■■□□□ 1.72
NAF1Q96HR8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
NAF1Q96HR8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NAF1Q96HR8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NAF1Q96HR8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NAF1Q96HR8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.77■■□□□ 1.72
NAF1Q96HR8 AC021231.2-201ENST00000594613 730 ntBASIC25.77■■□□□ 1.72
NAF1Q96HR8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
NAF1Q96HR8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.76■■□□□ 1.71
NAF1Q96HR8 MIR639-201ENST00000384974 98 ntBASIC25.76■■□□□ 1.71
NAF1Q96HR8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.76■■□□□ 1.71
NAF1Q96HR8 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
NAF1Q96HR8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.76■■□□□ 1.71
NAF1Q96HR8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.75■■□□□ 1.71
NAF1Q96HR8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
NAF1Q96HR8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.74■■□□□ 1.71
NAF1Q96HR8 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.74■■□□□ 1.71
NAF1Q96HR8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
NAF1Q96HR8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.74■■□□□ 1.71
NAF1Q96HR8 AC120057.4-201ENST00000624722 1615 ntBASIC25.74■■□□□ 1.71
NAF1Q96HR8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.73■■□□□ 1.71
NAF1Q96HR8 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
NAF1Q96HR8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.71■■□□□ 1.71
NAF1Q96HR8 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NAF1Q96HR8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
NAF1Q96HR8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.7■■□□□ 1.7
NAF1Q96HR8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.69■■□□□ 1.7
NAF1Q96HR8 AC016575.1-201ENST00000607026 382 ntBASIC25.69■■□□□ 1.7
NAF1Q96HR8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NAF1Q96HR8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NAF1Q96HR8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NAF1Q96HR8 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
NAF1Q96HR8 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.67■■□□□ 1.7
NAF1Q96HR8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
NAF1Q96HR8 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NAF1Q96HR8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NAF1Q96HR8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NAF1Q96HR8 HSD17B1P1-201ENST00000590052 955 ntBASIC25.65■■□□□ 1.7
NAF1Q96HR8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.65■■□□□ 1.7
NAF1Q96HR8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.64■■□□□ 1.7
NAF1Q96HR8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
NAF1Q96HR8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NAF1Q96HR8 MIR3648-2-201ENST00000581792 180 ntBASIC25.63■■□□□ 1.69
NAF1Q96HR8 MIR3648-1-201ENST00000615959 180 ntBASIC25.63■■□□□ 1.69
NAF1Q96HR8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
NAF1Q96HR8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
NAF1Q96HR8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
NAF1Q96HR8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NAF1Q96HR8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
NAF1Q96HR8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.6■■□□□ 1.69
NAF1Q96HR8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.6■■□□□ 1.69
NAF1Q96HR8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
NAF1Q96HR8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NAF1Q96HR8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms